FMO12781.5prime Sequence
395 bp (395 high quality bases) assembled on 2013-01-29
> FMO12781.5prime
CAGTCGACATGCGAACGGTGCCCATCTTGTTGCTAATTTGCTGCCTAGGC
TGGTTACACAAAGGCCAAGCTGACGAAAGGAAGATTGGCGCTGTGGGTCC
GCCTATGAAACAGAGGAGTCTTCGACATGTAAGCTCCTTTGCTAATCCAG
GGCAACCGGGTAGACCTGGCAGCGGAAGACCAGGACGACCTGGTCAGGGA
ATGCCTGGCCGACCTGGGCGTCCAGGAGGATCAGGTGGAGCTGGAGGAGC
CGGAGGAAGTGGAGGTGATGGAGGAGCAGGTGGGGCTGGCGCACGACCAG
TAAGAGGAGGGTATTGGAGGAAAGGTATTTCATTGGGTCAAAGGCGACCA
GAGCCAAGGTCAAAATATTATTTGTATGCAAGCTTTCTAGACCAT
FMO12781.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42521-RA | 457 | CG42521-RA | 14..382 | 9..377 | 1845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10623141..10623456 | 377..62 | 1580 | 100 | Minus |
| 3L | 28110227 | 3L | 10623508..10623563 | 64..9 | 280 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 18:31:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 1106..1138 | 201..233 | 102 | 78.8 | Plus |
FMO12781.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:09 Download gff for
FMO12781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42521-RA | 14..386 | 9..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:42 Download gff for
FMO12781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42521-RA | 14..386 | 9..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:51 Download gff for
FMO12781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42521-RA | 14..386 | 9..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:51 Download gff for
FMO12781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10623137..10623454 | 64..381 | 99 | <- | Minus |
| 3L | 10623509..10623563 | 9..63 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:42 Download gff for
FMO12781.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10616237..10616554 | 64..381 | 99 | <- | Minus |
| arm_3L | 10616609..10616663 | 9..63 | 100 | | Minus |
