Clone FMO12782 Report

Search the DGRC for FMO12782

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:82
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17237-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12782.5prime Sequence

602 bp (602 high quality bases) assembled on 2013-01-29

> FMO12782.5prime
CAGTCGACATGATGTCCAGGAAAGGCAATCAACTCCACCCGTCATCAATC
CGTCCATCATCGACCACACCGGACTGCAATCAGAAGCGGCGAGGCGACAT
GACAGCTCCTCCTCCGAACCCAAAGCCAGAGAAAAGCCGCATCATGGAGA
TGCATGCGATTTTTCTGGGGCACGACACTCGCGGCGACAATAAGATATCC
ATCCGGCACCTGGGCCATTGTCTGCGTGCGATGGGCGCCACTCCCACGGA
GGCGATGGTCAGCAAACATGTCCGCCAGTACGAGGCCTCCACCATGCAGC
GCATATGCTTCGATGAGGTCATGGGCATCTACTCCAGTCTTGGCAAGCAC
GGCGGCATGTTGTCTCCCAAGAAAAAACAGATCGAGGCGGACCAGTTCGT
ATCCAGTCTAAGGGTCTTTGATACGGATAAGTCCGGTTGGATTCCCGCCA
TCAGACTCCGGCGCATTCTAACCAAGACCGGGGAGTGCATGGGCAGCATG
GAAGTGGACGAGCTGCTCCAGGGTAGGATCAACAAAGACGGCTTGGTCGA
CTACAAGAAGCTGGTTCAAGACATTATCTATGGGGCAAGCTTTCTAGACC
AT

FMO12782.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG17237-RA 914 CG17237-RA 210..785 9..584 2865 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2288632..2289207 584..9 2865 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 18:43:37 has no hits.

FMO12782.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:25 Download gff for FMO12782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17237-RA 156..745 1..592 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:34 Download gff for FMO12782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17237-RA 202..791 1..592 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:29 Download gff for FMO12782.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17237-RA 202..791 1..592 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:29 Download gff for FMO12782.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2288626..2289212 1..592 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:34 Download gff for FMO12782.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2288626..2289212 1..592 98   Minus