FMO12784.5prime Sequence
377 bp (377 high quality bases) assembled on 2013-01-29
> FMO12784.5prime
CAGTCGACATGGAATACGGAAATGGTATGCAATACGATGGTTATAGCCAA
GGTGGCGAGGGCTTTGAAATGCTGTACAACCAAACGAGCAGTGGCCATGG
ATATAGCCAGCAGCAGAGTAATTGCGGACAAGGTTCTTCAAATTTTAATG
GTGCATCTGCATCGCTTGGAGGTCCTGGCTATCGCAGTCCTTTGCGATAC
ACAAAAATGCTTCGTGAGATGAACTCTCGCAACGGGCTTTACTCTCCAAT
GGAACAGCAGCGGAGCAGTGGGCAAGGCGACTACTATAATACATTGCCCG
GCCTTGGCGGCCCAGAAGGTCAAGCTTATCAGTCGCGGGGCAATGGAAAT
CCATACTACGCAAGCTTTCTAGACCAT
FMO12784.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15219-RA | 521 | CG15219-RA | 111..462 | 8..359 | 1730 | 99.4 | Plus |
| CG15219-RC | 505 | CG15219-RC | 111..446 | 8..359 | 1480 | 94.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22105116..22105299 | 241..58 | 890 | 98.9 | Minus |
| 2L | 23513712 | 2L | 22104950..22105067 | 359..242 | 590 | 100 | Minus |
| 2L | 23513712 | 2L | 22105350..22105402 | 60..8 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:43:43 has no hits.
FMO12784.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:26 Download gff for
FMO12784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 101..461 | 1..364 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:39 Download gff for
FMO12784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 107..467 | 1..364 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:34 Download gff for
FMO12784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15219-RA | 107..467 | 1..364 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:34 Download gff for
FMO12784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 22104945..22105067 | 242..364 | 98 | <- | Minus |
| 2L | 22105116..22105297 | 60..241 | 98 | <- | Minus |
| 2L | 22105351..22105406 | 1..59 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:39 Download gff for
FMO12784.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 22105116..22105297 | 60..241 | 98 | <- | Minus |
| arm_2L | 22105351..22105406 | 1..59 | 94 | | Minus |
| arm_2L | 22104945..22105067 | 242..364 | 98 | <- | Minus |
