FMO12790.5prime Sequence
794 bp (794 high quality bases) assembled on 2013-01-29
> FMO12790.5prime
CAGTCGACATGAAGTTGGTCTGGATGTTGATGTCCTTGCAGCTAATGCTT
TTGGCAACTGCTCTTAGTGCCAGGCAATGTGTCAAGCCAACTGCTTCACC
AAAGCCCCCTGAGGATCCTGACGACCCCACTGATGATCCCTGGGATCCCA
CAGATGACTCATCGGAGGACCCATCCGATTCGACCGATGAACCATGGAAG
CCCACTGCTAAGCCCACAGTAGTACCAACTGAACCGCCCTCGAACATTAC
ATCTACTGAAAATCCATCGGAGCCAACTGAAAATCCATTGAATCCCACGG
GAAGTCCCACCAACGACGAACCATCGGAGCCAACCGAAGAATCCACTGAA
AATCCATCGGATCCCACAGGACAGCCCACTGGAGAAACGTCTAATCCATC
AGATCAACCCACTGACAGTCCCACAGGTCAACCGACTCAAGAAACAACTG
AAGAGACTAAAATACCGGCGGGGGAAACCACCAATGAAGGTACTTCGGAT
TCCACTGAAGAGCCCACTGGAGAACCATCAATTCCCACGCATGAGCCAGA
AGAATCCTCGGGCGATCCATCAGATCCGACAAGTGCGACCACCCAGACAA
TTCCCAACGTGGATGCGAACGCCTCCTGTAGAGCTCATCAAGGTGTGCAA
TTTCTGCCACATCCGTACGATTGTCATTTATACATACATTGCGATGGAGA
TATTGGATTCATCAAGGATTGTCCAAGTGATCTGTACTGGAACTCGGTAA
ACCAGACTTGCGACAAGACCTGTGCCGCAAGCTTTCTAGACCAT
FMO12790.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:32:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14125-RA | 839 | CG14125-RA | 18..785 | 9..776 | 3840 | 100 | Plus |
| CG14125-RB | 860 | CG14125-RB | 46..806 | 16..776 | 3805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11974996..11975756 | 16..776 | 3805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:32:20 has no hits.
FMO12790.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:14 Download gff for
FMO12790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 13..790 | 1..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:09 Download gff for
FMO12790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 13..790 | 1..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:12 Download gff for
FMO12790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 13..790 | 1..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:12 Download gff for
FMO12790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11974994..11975761 | 13..782 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:09 Download gff for
FMO12790.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11968094..11968861 | 13..782 | 99 | | Plus |
