Clone FMO12795 Report

Search the DGRC for FMO12795

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:127
Well:95
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14367-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12795.5prime Sequence

954 bp (954 high quality bases) assembled on 2013-01-29

> FMO12795.5prime
CAGTCGACATGTCGGTGGAAGACTCCTGGGTTTTCGATTCGCTGGTGTGC
TTCCTGCACGGGCCCATTTGGAATGCTCCGCTTCAGACGTTCATAGAGCA
AAAGTCCTTAGTCTTCGATCCCAACCAGCAGTTGGATGAGAACAATCCGG
ACATACTGCAGATACACGAGGAATACAAGAATCTGGTGGACTACATGCTC
GGCAGCTTCATGGAGGAGATGCAGATATCACCGGAGCAGTTCGAAATGGC
CTGTCTGGAGGGTAGGCAGCAGGGTCAGGGCGAGAATCCCTTTCATTTCC
ACCAGGTGCTTTTCCAGCAGATATGGGCCGCCAACGATCTGAAGATATTC
ATACGGATGATGACGCAACGCAACGTGGAGCTTCAGCTGCAGGCCCTGGA
TCTCATAGAGAAAAATCAATTAGCCCCTGGTGGCGTCGAGGAGGGGGATG
ACCGCAGTGCGGACGCTAGCTCGGATCCAGGGGATACCGCCTCCGAGGTG
GAACAAATGATAGCCAAGACGGTGTCTGACGAACTGGAGAGCCCCGAAGC
GGCCCTAACTCCAGAGCAGGAGCCCAATCTGGAGCTGGTTAACGACAAGT
TCCAGCGCCTGAATCTGTTCTTCGAGCAGGAGGATCGTGTGGACCCCAGT
GATGTTGTCTCGCGGCAGGAGTACCTGCGCCAACAGCGTGACAAGATTGT
GGAGATAAAGAAGCAGACGCGTGCAAAGCAACTGCAAGAGACCATGTCCC
GCGGTACTCCACATGCACCGGAAGGAGCACGTCCCAGCTCCGCGTTGGTG
GCCCAACAGCTGCTCGAGAATGGCGGCCAGACTAACGAGCTCTCCATGCC
GGCACCACTAGAAGCTGAGGAGAACGCTGCCCTGCAGCTCAGACGCAATC
TTGCCAAGCGCTTGCGCAGCGAAGTGATTGAGCAGAGCAAGCTTTCTAGA
CCAT

FMO12795.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14367-RA 1204 CG14367-RA 1..928 9..936 4610 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13694782..13695237 481..936 2250 99.6 Plus
3R 32079331 3R 13694208..13694423 110..325 1065 99.5 Plus
3R 32079331 3R 13694471..13694635 318..482 825 100 Plus
3R 32079331 3R 13694053..13694155 9..111 515 100 Plus
Blast to na_te.dros performed 2014-11-28 18:31:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dbuz\Osvaldo 9045 Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). 1923..1998 177..251 116 63.2 Plus

FMO12795.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:11 Download gff for FMO12795.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14367-RA 1..928 9..936 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:49 Download gff for FMO12795.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14367-RA 1..928 9..936 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:57 Download gff for FMO12795.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14367-RA 1..928 9..936 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:57 Download gff for FMO12795.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13694053..13694155 9..111 100 -> Plus
3R 13694210..13694418 112..320 100 -> Plus
3R 13694474..13694634 321..481 100 -> Plus
3R 13694783..13695237 482..936 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:49 Download gff for FMO12795.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9520196..9520356 321..481 100 -> Plus
arm_3R 9519775..9519877 9..111 100 -> Plus
arm_3R 9519932..9520140 112..320 100 -> Plus
arm_3R 9520505..9520959 482..936 99   Plus