FMO12795.5prime Sequence
954 bp (954 high quality bases) assembled on 2013-01-29
> FMO12795.5prime
CAGTCGACATGTCGGTGGAAGACTCCTGGGTTTTCGATTCGCTGGTGTGC
TTCCTGCACGGGCCCATTTGGAATGCTCCGCTTCAGACGTTCATAGAGCA
AAAGTCCTTAGTCTTCGATCCCAACCAGCAGTTGGATGAGAACAATCCGG
ACATACTGCAGATACACGAGGAATACAAGAATCTGGTGGACTACATGCTC
GGCAGCTTCATGGAGGAGATGCAGATATCACCGGAGCAGTTCGAAATGGC
CTGTCTGGAGGGTAGGCAGCAGGGTCAGGGCGAGAATCCCTTTCATTTCC
ACCAGGTGCTTTTCCAGCAGATATGGGCCGCCAACGATCTGAAGATATTC
ATACGGATGATGACGCAACGCAACGTGGAGCTTCAGCTGCAGGCCCTGGA
TCTCATAGAGAAAAATCAATTAGCCCCTGGTGGCGTCGAGGAGGGGGATG
ACCGCAGTGCGGACGCTAGCTCGGATCCAGGGGATACCGCCTCCGAGGTG
GAACAAATGATAGCCAAGACGGTGTCTGACGAACTGGAGAGCCCCGAAGC
GGCCCTAACTCCAGAGCAGGAGCCCAATCTGGAGCTGGTTAACGACAAGT
TCCAGCGCCTGAATCTGTTCTTCGAGCAGGAGGATCGTGTGGACCCCAGT
GATGTTGTCTCGCGGCAGGAGTACCTGCGCCAACAGCGTGACAAGATTGT
GGAGATAAAGAAGCAGACGCGTGCAAAGCAACTGCAAGAGACCATGTCCC
GCGGTACTCCACATGCACCGGAAGGAGCACGTCCCAGCTCCGCGTTGGTG
GCCCAACAGCTGCTCGAGAATGGCGGCCAGACTAACGAGCTCTCCATGCC
GGCACCACTAGAAGCTGAGGAGAACGCTGCCCTGCAGCTCAGACGCAATC
TTGCCAAGCGCTTGCGCAGCGAAGTGATTGAGCAGAGCAAGCTTTCTAGA
CCAT
FMO12795.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:31:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14367-RA | 1204 | CG14367-RA | 1..928 | 9..936 | 4610 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:31:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13694782..13695237 | 481..936 | 2250 | 99.6 | Plus |
3R | 32079331 | 3R | 13694208..13694423 | 110..325 | 1065 | 99.5 | Plus |
3R | 32079331 | 3R | 13694471..13694635 | 318..482 | 825 | 100 | Plus |
3R | 32079331 | 3R | 13694053..13694155 | 9..111 | 515 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:31:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 1923..1998 | 177..251 | 116 | 63.2 | Plus |
FMO12795.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:11 Download gff for
FMO12795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14367-RA | 1..928 | 9..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:49 Download gff for
FMO12795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14367-RA | 1..928 | 9..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:57 Download gff for
FMO12795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14367-RA | 1..928 | 9..936 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:57 Download gff for
FMO12795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13694053..13694155 | 9..111 | 100 | -> | Plus |
3R | 13694210..13694418 | 112..320 | 100 | -> | Plus |
3R | 13694474..13694634 | 321..481 | 100 | -> | Plus |
3R | 13694783..13695237 | 482..936 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:49 Download gff for
FMO12795.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9520196..9520356 | 321..481 | 100 | -> | Plus |
arm_3R | 9519775..9519877 | 9..111 | 100 | -> | Plus |
arm_3R | 9519932..9520140 | 112..320 | 100 | -> | Plus |
arm_3R | 9520505..9520959 | 482..936 | 99 | | Plus |