FMO12803.5prime Sequence
1131 bp (1039 high quality bases) assembled on 2013-01-29
> FMO12803.5prime
CAGTCGACATGGCCCTTTACCGCTCTGATCCGTATTCCATAATGGACGAC
CAACTTTTTTCAAATATTTCAATATTCGATATGGATAATGATCTGTACGA
TATGGACAAACTCCTTTCGTCGTCCACCATTCAGAGTGATCTCGAGAAGA
TCGAGGACATGGAAAGTGTATTTCAAGACTATGACTTAGAGGAGGATATG
AAGCCAGAGATCCGCAACATCGACTGCATGTGGCCGGCGATGTCCAGCTG
TTTGACCAGCGGTAACGGTAATGGAATAGAGAGCGGAAACAGTGCAGCCT
CGTCGTACAGCGAAACCGGTGCCGTATCCCTGGCGATGGTTTCCGGCTCT
ACGAATCTCTACAGCGCGTATCAACGATCGCAGACGACAGATAACACCCA
GTCAAATCAACAGCATGTCGTCAACAGTGCCGAGAACATGCCGGTGATCA
TCAAGAAGGAGCTCGCAGATCTGGACTACACGGTCTGTCAGAAGCGCCTC
CGTTTGAGCGGCGGTGACAAGAAGTCACAGATCCAGGACGAGGTCCATTT
AATACCGCCCGGCGGAAGTTTGCTCCGCAAGCGGAACAACCAGGACATTA
TCCGCAAATCGGGCGAATTGAGCGGCAGCGATAGCATAAAATACCAGAGA
CCAGACACACCTCACAGTCTTACCGACGAGGTGGCCGCCTCAGAGTTTAG
ACATAACGTCGACTTGCGTGCCTGCGTGATGGGCAGCAATAATATCTCGC
TGACCGGCAATGATAGCGATGTCAACTACATTAAGCAAATCAGCAGGGAG
CTTCAGAATACCGGCAAGGATCCGTTGCCGGTGCGTTACATCCCGCCGAT
CAACGATGTCCTCGATGTGCTCAACCAGCATTCCAATTCGACGGGTGGCC
AACAGCAGTTGAACCAACAGCAACTGGACGAGCAACACAGGCCATCGATA
TAGCCACTGACGCACACCAGTGGATTCTCCGCCGACGACCGGCTTCTGAT
AGGTGACTCCGATGACGGTGAACCCTCCACCTTTGACCTGCGCATCATCG
ACTAGCCAAGCGGGCAGCCATGCAGCATCCCCACAAAACAACAACAGCAC
AACAAAACACAATGAGAACACGGCAACGCAG
FMO12803.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:18:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dm-RA | 3484 | CG10798-RA | 632..1736 | 9..1107 | 5105 | 98.2 | Plus |
| dm-RB | 9166 | CG10798-RB | 628..1732 | 9..1107 | 5105 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:18:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3375006..3376040 | 9..1043 | 4895 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:18:49 has no hits.
FMO12803.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:33 Download gff for
FMO12803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dm-RA | 600..1720 | 1..1118 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:18 Download gff for
FMO12803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dm-RB | 620..1740 | 1..1118 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:14 Download gff for
FMO12803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dm-RB | 620..1740 | 1..1118 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:14 Download gff for
FMO12803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3374998..3376118 | 1..1118 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:18 Download gff for
FMO12803.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3269031..3270151 | 1..1118 | 97 | | Plus |
