FMO12809.5prime Sequence
1120 bp (1001 high quality bases) assembled on 2013-01-29
> FMO12809.5prime
CAGTCGACATGAACCCATCCGAGCTGCGCATGATGTGGATGAGTAGTCAG
TACAACTCGGAGCGCATTACACTGGAGGATGCGGCCACTCTGCTGGGTCA
TCCCACTGTTGGACTCTCTGTCATGGAGGACCTCTCCGCCCATCAGCCAA
CTTTGGACATGAATCCGATGATGAGCCTAATGGGGGGAGATTTCACTGGT
CAAGCGGCGGCGACTGCTGCGGCACTGGGTGTACAGCCGGGCACCCTGAT
TGCCACCAACTCGAACAACCTGTACGGATTTGCCCACATGGGCGGCCTGC
AGCAGCAACTGCTCCAGCAGTCGGCGGCGGCGGCAGTCTTCCAGAACTAT
GCGGAGGCAATGGATAACGATGTGGAGAACGGCATGGTTGGCATGGCCAT
GGAGGCGGTCGTGGACGATGACGACCAAGTGTACGGTCAGAGGGACAATA
ACTTTGATGATAATGGATCCGAGTTGGAGCCCAAGCAAGAGATTATCAAC
ATCGACGACTTTGTGATGATGAACGAGGACAATAATTCGTACGATGGCAC
CGACTTTATGACCTCCTCCGATAAGGACATTTCGCAGTCCTCCTCCTCCT
GCATGGCACAGATGCCCGGAAGCTTGGGCGTCCCTGGAGTCGAGCACGAT
CTTTTGGTTCCACTGCCCGATGGCCTGCTGCACCACAAGCTGCTGGGCAC
AACTCTGGTCCCTGCGATGGGTACGCTAAATGGCAATGCCTTTGGCAACA
TAATGGTCAGCACTGAAAACACATCCAGCAAGCAAATGCAGCGCACCTAT
AGTACGGCCAAGGGAGCCAATTCCACCGCAACCACCGCCACCTGCAGTGC
CTCCACGTCCTCCGCATTGCGATCACAGCGCAGACGCGCAAGATCGAGCC
CGTTAACAGGCCAGGACTGGTGCTGAGACACCCATCGCTACAGGGCAACA
TTGACCCTTCGTGATCCCATAAAAGAAAGATGGCATGCCTGTCTGTAAAC
GTTGTGGCGCCATTGGAGTGAGACACATTTCTCACAAATCGCGAACGTTT
GCAGCAATGGCTGGTGCCCGAGGCGAACTATATTCGTGTACCTAAACACT
GATGGAGGAAACAAGCAACA
FMO12809.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:19:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfmbt-RD | 4765 | CG16975-RD | 300..1410 | 9..1108 | 5010 | 97.7 | Plus |
Sfmbt-RC | 4846 | CG16975-RC | 312..1422 | 9..1108 | 5010 | 97.7 | Plus |
Sfmbt-RB | 4777 | CG16975-RB | 312..1422 | 9..1108 | 5010 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:19:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13174440..13175277 | 987..155 | 3880 | 98.9 | Minus |
2L | 23513712 | 2L | 13175666..13175813 | 156..9 | 740 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:19:27 has no hits.
FMO12809.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:37 Download gff for
FMO12809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfmbt-RB | 310..1410 | 9..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:40 Download gff for
FMO12809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfmbt-RB | 312..1412 | 9..1100 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:34 Download gff for
FMO12809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfmbt-RB | 312..1412 | 9..1100 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:34 Download gff for
FMO12809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13174439..13175276 | 156..988 | 98 | <- | Minus |
2L | 13175667..13175813 | 9..155 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:40 Download gff for
FMO12809.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13174439..13175276 | 156..988 | 98 | <- | Minus |
arm_2L | 13175667..13175813 | 9..155 | 100 | | Minus |