FMO12810.5prime Sequence
715 bp (593 high quality bases) assembled on 2013-01-29
> FMO12810.5prime
CAGTCGACATGCTGCAGTACAAGAGTGCCGCCAGTGCGGCGACTAGTGCG
CCACCCGCCACGCCTTTGGCGGCAGGCGGTTCCAGCAAGGCGACGATTCC
ACCAAATGGAGCTAGTGCAGCAGCTTCACAAACGCAGGTTCACGGTGCTC
CCGGGACACCAACCATGCAGCAGATCATCAACATTCACCAAATGCCTCCT
CAGTTTGCAGGCGGAGCGGTTGCCGGGAACGGACAGAACGCTGGCATGCC
CCAAAACATGTTCCAGATCGTACAGCCCATGCCCATGCAAACGGTGAACA
TTGATGGCCAGGAGGCCATCTTCATACCAAACCTCAATGCACAACTGGCC
ACCGCTCAGGCGGTCAACTTCAACGGGCAACAGGCCTTTATCACGCCCAA
CGGTCAAATTCTGCGGGCTCCCCAGATGGCAGCTAATCCGGCAGTCTCTA
ACTGCATTCAGCTGCAACAGCTGAACGGCTTGGCCAGGAGCAAACCCAGC
TGATCACCATACCCGGCACCAACATTCAAATACCCGTCACCAATCTCATT
CAGCACACAGCAGCACAACAGTGCACCAGGGTACAGTGCACAGCAGCACA
GAACAATGCATCTGGAGCCATGATCGGGAGTTACCATAGTGGAAAGCGGT
CAGCTGCGGCAGCATCACATACGGACAACTTGCATACCACCTCGTACGCG
CGCGATGGATGCTGG
FMO12810.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spps-RB | 3490 | CG5669-RB | 279..956 | 8..668 | 2955 | 97.2 | Plus |
| Spps-RA | 3490 | CG5669-RA | 279..956 | 8..668 | 2955 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24226069..24226656 | 590..8 | 2695 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:44:13 has no hits.
FMO12810.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:30 Download gff for
FMO12810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spps-RA | 276..946 | 1..657 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:07:00 Download gff for
FMO12810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spps-RA | 273..943 | 1..657 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:49 Download gff for
FMO12810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spps-RA | 273..943 | 1..657 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:49 Download gff for
FMO12810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24225996..24226660 | 1..654 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:07:00 Download gff for
FMO12810.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20051718..20052382 | 1..654 | 96 | | Minus |
