FMO12814.5prime Sequence
1112 bp (990 high quality bases) assembled on 2013-01-29
> FMO12814.5prime
CAGTCGACATGACGTCGCAAGTGCCGTGCTACACGATAATCAACTCGCCG
GACCTGGAGGTGACCAACGAGATGCAACTGAAGCGCGATCTCGAAAAGGG
CGACACGAACGTGAAGATCGAGACGCTGAAGCGGGTAATCAAGTTGCTGC
TGAATGGGGAGCGGTATCCGGGCCTGATCATGACCATCATACGCTTCGTC
CTGCCGGTGCAGAACCACACGATCAAGAAGCTGCTGCTCATCTTCTGGGA
AATTGTGCCGAAGACATCGGCGGATGGGAAGCTGCTGCAGGAGATGATAC
TGGTGTGCGATGCGTACAGGAAGGATTTGCAGCATCCCAATGAGTTTCTG
CGCGGCTCGACACTGCGCTTCCTCTGCAAGCTGAAGGAGCCGGAGCTGCT
GGAGCCACTGATGCCGGCCATACGGGCGTGCCTGGATCACCGGCACTCGT
ATGTGCGACGAAATGCCGTGCTGGCCATCTTTACCATCTACAAGAACTTC
GATTGGCTGGTGCCCGATGGGCCGGAGCTGATTGCCAGCTTCCTGGACAC
GCAGCAGGACATGAGCTGCAAGCGCAACGCCTTCCTTATGCTACTGCATG
CGGACCAGGAGCGAGCGCTCAACTATCTGGCCAGTTGCATCGATCAGGTG
CACACTTTCGGCGATATACTGCAGCTGGTCATCGTGGAGCTGATCTATAA
GGTGTGCCATGCCAATCCCGCCGAGCGTTCGCGGTTCATACGCTGCATCT
ACAACCTGCTGAACTCCAGCTCGAATGCGGTGCGTTACGAGTCCGCTGGC
ACATTGATTACGCTCTCGCTGGCGCCCACGGCCATCAAGGCGGCGGCCAG
TTGCTACATCGAACTGGTGGTCAAGGAGAGCGACAACAACGTCAGCTATC
GTGCTCGATCGCCTGGTGGCCATGAAGGAGCACGAGGGCCTGGAGAAGTG
ATGCAGATCTGGTGATGACGTTCTGCGCGCCTGACCGCACCAAACATCGA
GGAGCCAGGAAACCCTCGCGCTGACCCTGGACTTGGCTATTCGCGTAAAA
TGCGGAATGGGCTGGTTCTCAGAAGGAGTGTCAACACATGTGGAGACCAA
AGAACCTGCAGT
FMO12814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:19:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| betaCOP-RA | 3203 | CG6223-RA | 150..1232 | 9..1078 | 4965 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:19:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18384045..18385093 | 1048..9 | 4705 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:19:53 has no hits.
FMO12814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:39 Download gff for
FMO12814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCop-RA | 95..1172 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:52 Download gff for
FMO12814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCop-RA | 95..1172 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:48 Download gff for
FMO12814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| betaCOP-RA | 142..1219 | 1..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:48 Download gff for
FMO12814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18384024..18385101 | 1..1066 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:52 Download gff for
FMO12814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18278057..18279134 | 1..1066 | 97 | | Minus |
