FMO12821.5prime Sequence
1103 bp (974 high quality bases) assembled on 2013-01-29
> FMO12821.5prime
CAGTCGACATGTCTGATCCAGGAAGCGCCGGCTACAACATAACCAAGGAT
CCGGCCCTGGCAAAGAGTCGAATCTTCTTGGGCAACCTGCCGGTTTGCAC
GCGCGAGGAGCTGGTGAGCATTTGCCAGCCATATGGCAAAGTGCTCGGTT
CGATGGTCCAGAAGAACTACGGATTCGTGCAGTTTGAAACGGAGGAGCTG
GCCAATAAAGCCGCCTCCGCCCTGCACAAGTCCACTTTTAAGCAAAACAT
GCTCACCGTACGCAACGCCAGCATTAAATCGAAGGCGGCCAATGCTATCG
CCAAAAGAAATTCAAATCAAGGAGGCCAGGTGACAGTTCAGGGTGGACTT
GTGATGTCAGCGGCGGCAGCGGCAGCAGGTCAACCCCTCATCAATGATTG
CGAGATCATAGTCCAAAATCGCGAGAATACCAAATACGCAGAATACATTG
AGGAGCGGCTAAAGAATTCCAGTCTGCGCGTGGATGTACTCTTTCCCAAC
GAGGACGTCTTGCTAGGCAAGGTCCTGGCCAACATCTCTTCGCGCGGCTG
CTTGTATGCGGTATTGGTCACGCCGCAGCACGAGGAACACAACAGCATCA
CAGTAAACATTTTGTATGGCGTACCCGCTGAGCATCGCAACATGCCGCTG
GAGGACGCCATCACCCTGATCTCCACCGATTTTAGGCTCAAAAAACAGCG
CGACGCTGTCGTCTTACCGCCGTCAACATCCATACACAAGGGACAGCGAC
GACATCCCCAGGAAATGCAGGGGCTGCTGGAAAGGCTGGCAGACAATCAT
CCATTGACCGCGTCGCAGTACGAGGTGATTCTTAAGTACCTCGAAGCGAA
CGCGAGGAGCAACTGAAGCGAGAGGTGGGCGAGGACCATGCTCTGGCCAA
GCTAAAAGCTCCCGATCCAGAGATCGAGCTGCAGAAGAAAATTCTTAGCA
TCATGACAAGCCGGCAGTTACGATGTCACCAGCGAGCTCATGTATCTCAC
TTTCGAGGAAGTCAAGGAGGACAGAAGGCTAATTGTAGCTACTTGCCTGA
AGATCAGATGGTGGCGGCCCTGGAATGGTTACAACTCGGATCTCGAACTG
ATT
FMO12821.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:20:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Neos-RB | 1260 | CG8614-RB | 59..1147 | 9..1094 | 5095 | 98.3 | Plus |
Neos-RA | 1449 | CG8614-RA | 248..1336 | 9..1094 | 5095 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:20:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7242360..7243026 | 431..1094 | 2835 | 97 | Plus |
3L | 28110227 | 3L | 7241875..7242296 | 9..430 | 2110 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 1768..1832 | 250..315 | 111 | 65.2 | Plus |
FMO12821.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:43 Download gff for
FMO12821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Neos-RA | 181..1281 | 4..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:14 Download gff for
FMO12821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Neos-RA | 245..1345 | 4..1103 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:07 Download gff for
FMO12821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Neos-RA | 245..1345 | 4..1103 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:07 Download gff for
FMO12821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7241872..7242296 | 4..430 | 99 | -> | Plus |
3L | 7242360..7243035 | 431..1103 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:14 Download gff for
FMO12821.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7234972..7235396 | 4..430 | 99 | -> | Plus |
arm_3L | 7235460..7236135 | 431..1103 | 96 | | Plus |