Clone FMO12823 Report

Search the DGRC for FMO12823

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:128
Well:23
Vector:pMK33-CFH-BD
Associated Gene/TranscriptmRpL12-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12823.5prime Sequence

572 bp (572 high quality bases) assembled on 2013-01-29

> FMO12823.5prime
CAGTCGACATGCACATCACACGCCTCGCCCTTCGCCAGATTTCGCGCCAA
GTGCAGCTGCATCGCATGTACAGTGCAGCGGCTCCGGCCGCCGCAGTCTC
GGGTGCGGAAAAACTGGTGCCTCCCGCGCCGGAAGGAGCCGCCAAGCCAC
CCAATCCCAAACTGGACTCGATTGTCAACAACATTGCCGCGCTCAATCTC
CTCGAGGTGGCCGAGCTGAGCACCCTGCTCAAACAGAAACTGAACCTGCC
CGAGACCGCATTTGCCCCACAATTCGCCGCTGGGCCGGCACGTGCTGCTC
CCGCCGAGGATGAGGAGGAGGCAGCGCCCAAGAAGGTACAGACCTCCTTC
AAGGTCAAGCTGGTCAAGTTCGACGAAAAGCAGAAGGTGGCGCTGATCAA
GGAGGTGAAGAACCTACTCGAGGGCATGAACCTGGTGCAGGCCAAAAAGT
TCGTCGAGAGCGCACCGACCATCGTTAAGGAGGACATCCCCAAGGAGGAG
GCCGAGAAACTCAAGGAGGCACTGTCCAAGGCGGGCGCCATCATCGAGAT
CGAGGCAAGCTTTCTAGACCAT

FMO12823.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:19:41
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL12-RA 738 CG5012-RA 101..646 9..554 2730 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8956947..8957492 9..554 2730 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:19:40 has no hits.

FMO12823.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:38 Download gff for FMO12823.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpL12-RA 93..645 1..554 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:52:45 Download gff for FMO12823.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpL12-RA 94..646 1..554 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:57:39 Download gff for FMO12823.5prime
Subject Subject Range Query Range Percent Splice Strand
mRpL12-RA 94..646 1..554 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:57:39 Download gff for FMO12823.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 8956940..8957492 1..554 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:52:45 Download gff for FMO12823.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8950040..8950592 1..554 99   Plus