FMO12825.5prime Sequence
1098 bp (997 high quality bases) assembled on 2013-01-29
> FMO12825.5prime
CAGTCGACATGCCGGAATACAAGAAGCTAGAGGACCAGGAGTCAGATGTG
GAGAACGCAAATAGAACCACCGTCCAGAACACTGCTACCGTTCAGGACGC
CGGGGAGGGACAGAGGCAGGCGGCTGGCCAGCAGGCGGGACAAATGGTGA
CGGTGTCCTTGTTCATGCTTCTTTTCCTCGGCAGCTCCTACTTCCAACCG
CGACCACGACTGCATCAGTACAAGGGGGGCAGGGGCCATGGACTGCTGGA
GAAGTTCGACTGCAACATACAACTGGTGGAATCCATACCCATTGGCCTAA
CATATCCTGACGGCAGTCCACGATTCCTAAGCACTTACGAAGCTTGGCTG
GAGTTATTGGAGAGCGCCACGACCTCACTAGACATAGCATCCTTCTATTG
GACTCTGAAGGCCGAGGATACGCCCGGGGTGTCGGACAACAGCACTCGGC
CGGGCGAGGACGTCTTCGCAAGACTCTTAGCCAACGGAAACGGCGGTAGC
AGGTCGCCCAGGATCAAAATTCGCATTGCCCAGAGCGAACCCTCTAGTGG
CACACCCAATTTAAACACAAAGTTGTTAGCTAGCGCTGGCGCTGCCGAAG
TTGTTAGCATCTCGTTTCCCAAGTACTTTGGCAGCGGAGTGCTCCACACC
AAGCTGTGGGTGGTGGACAACAAGCACTTTTATCTGGGCAGCGCCAATAT
GGACTGGCGGGCACTGACCCAAGTCAAGGAGATGGGCGTGCTAGTCCAGA
ACTGTCCAGAACTGACCCATGATGTGGCCAAGATCTTTGGAGAGTACTGG
TACCTATGCAACAGTGAAAGTTCTCGCATTCCCGACTGGGACTGGCGTTA
CGCGACCAGCTACACTTGAAACATCCCATGCAGCTGAGTGTAAACAAAAT
ACTAGCATAGAGGGCTTCTATCTAGCTCACGCTCCCTTTCACCCTTCGGC
GAACAGACGACTGACGCATCTCAACCCTATAACACGCCATAACTACGTAA
ATTTGCCGTTATGACTATTATCCGCCCGATTCATTACGAGAAGACCACCA
TTATTGACCGTATCGCGAAGGCCTCTGGGAGGCGACGTAACGGGCGGG
FMO12825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9248-RC | 1926 | CG9248-RC | 103..1174 | 6..1061 | 4765 | 97.5 | Plus |
| CG9248-RA | 1806 | CG9248-RA | 103..1174 | 6..1061 | 4765 | 97.5 | Plus |
| CG9248-RB | 1757 | CG9248-RB | 54..1125 | 6..1061 | 4765 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:20:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21159272..21160007 | 198..930 | 3515 | 99.5 | Plus |
| 2L | 23513712 | 2L | 21159006..21159197 | 6..197 | 960 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:20:55 has no hits.
FMO12825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:46 Download gff for
FMO12825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9248-RB | 16..1083 | 1..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:28 Download gff for
FMO12825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9248-RB | 62..1129 | 1..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:21 Download gff for
FMO12825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9248-RB | 47..1114 | 1..1050 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:21 Download gff for
FMO12825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21159001..21159197 | 1..197 | 97 | -> | Plus |
| 2L | 21159272..21160140 | 198..1050 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:28 Download gff for
FMO12825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21159001..21159197 | 1..197 | 97 | -> | Plus |
| arm_2L | 21159272..21160140 | 198..1050 | 97 | | Plus |
