FMO12827.5prime Sequence
1088 bp (1015 high quality bases) assembled on 2013-01-29
> FMO12827.5prime
CAGTCGACATGGTTACGGCCACGGCGATTGCGGATCTGTGCATCTTCCTT
TTGACCTGGAACGTGGGCACCCATACGCCGCGAAATCAGGATCTGAGCTC
CCTTTTGTCCCTTAATGGCACCACCACTTGTCCGGATAACCAGCTGCCCG
ATATCTATGTAATCGGATTCCAGGAGGTGAGCACCACACCGCAGGTGCTA
AAAATCTTCAATGACGATCCGTGGGTGCTGAAGATCGCGGACTCTCTGAG
CGATCACCAGTTCGTAAAGGTGGACTCGAAGCAGCTGCAGGGAATTCTTA
TAACCATGTTCGCACAGCACAAGCACATCCCGCACATGAAAGAAATCGAG
ACAGAAGCCACGCGCACGGGACTTGGAGGGCTGTGGGGCAACAAGGGTGC
CGTAAGCATTCGACTTTCGCTCTACGGAACTGGCGTCGCATTCGTCTGCT
CCCATCTGGCGGCGCACGATGAGAAGCTGAAGGAGCGCATCGAAGACTAT
CACCAAATCGTGGACAATCACAAGTACAATGCGCAGGGATATCGCCGGAT
ATTCGATCACGACTTTGTCTTTTGGTTTGGCGATCTTAACTTCCGTCTCT
CCGGCGATATGTCCGCTTGGGATGTCCGCACGGATGTGGAGAACCAGCGA
TACGCTGATCTGCTCAAGCTCGACCAGTTGAATCTGCTCCGGGAGAAGGG
AAACGCCTTCAGCTTGCTGGAGGAGCAGCAGCCCAACTTTGCGCCCACTT
TTAAGTTCGTGGAAAGCACTAATGACTACAACTTGAAGCGGCGACCCGCC
TGGTGCGATCGGATTTTGCATCGCGTGCAGAGCAACATTTATCCGGGCAT
TACCCTGAGTGCCAACCAGCTGTCTTATCAGTCCCACATGGACTACACTC
TCTCGACCACAAGCTCGTATCGGCGACATTCACTACAGGTCGAGGCTGCC
CACCAGACCTACACGACGAGGAGCTCCACGAAATGACGCACCGATCTGCC
TCATCTCGGCGACGCCAATGTTAGTCTATCCTTCGCCATTTGGTGTTTTG
AGCCTGGTCCTATACTCACCTGCAGCTCTAGACCATCA
FMO12827.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:21:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6805-RA | 1770 | CG6805-RA | 311..1377 | 9..1068 | 4995 | 98.5 | Plus |
CG6805-RB | 1696 | CG6805-RB | 311..1325 | 9..1018 | 4890 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:21:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17005761..17006507 | 9..755 | 3735 | 100 | Plus |
2R | 25286936 | 2R | 17006787..17007075 | 754..1036 | 1085 | 96.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:21:04 has no hits.
FMO12827.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:47 Download gff for
FMO12827.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6805-RA | 309..1378 | 9..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:35 Download gff for
FMO12827.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6805-RA | 311..1380 | 9..1071 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:26 Download gff for
FMO12827.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6805-RA | 311..1380 | 9..1071 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:26 Download gff for
FMO12827.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17005761..17006507 | 9..755 | 100 | -> | Plus |
2R | 17006789..17007111 | 756..1071 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:35 Download gff for
FMO12827.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12893266..12894012 | 9..755 | 100 | -> | Plus |
arm_2R | 12894294..12894616 | 756..1071 | 94 | | Plus |