FMO12829.5prime Sequence
1121 bp (1000 high quality bases) assembled on 2013-01-29
> FMO12829.5prime
CAGTCGACATGAAATTTGCAATCGAGAGTATTAGCAAGAATTCTGGTCGA
CTAGGTCAACTGCGAATCAGGGATGGAGGACCCGAGTTCAAGACTCCCCT
TCTTTTGCAGACGACTAAGGGCGGAAGCATTCCGTGGCTGAGTGCGGATG
TTTTCGAGACTCATGTCAGCCGGAAGCCACAGGTGCTCCAATTCACACTG
TCCACAATGGAACAAATGACCGAGGCACTTACGCATTGGAACAGTGGTGG
GGGTCGCGGACTGAGCGACTACGTAGGACTACCAGGACATCTAAATATTC
TCCTGCTACGAGATCCCTGTGAAACAACGCCTTCCGGAGGTAACGACAGG
GATATACTGCCGTTGTTTACGAGAAGGGGCAAGGAATCGCTCTCTTCGGA
GCGCTACATGGAAATAGTAGCAAGTTTCAAGCCGGACATGTATGAGGGAC
TCTGCGATGCGGACACAAATTTAGAGAGTGCCAAGAAGCGGGTTCAGAAA
TCGGTTGACAGGACAGAGAAGTTTATGCAATACATCTACGAGCACCGGGG
CAAGGTGAATTCCACTCTGCTAGCTCCCATTGTGGGCGGATACAACACCT
TTGCTCGGACGCAGTCCATTAAACATGCCCGGGAACAGCCAGCGGGAAGC
TATGGAGGTTACATCTTCGAGGGTTTCCACGCGAATGGTCTATCAGCGAC
CACTTTGGACACTTCCAAACTACTGCCAATAGTAGAGCACTGCGTCAAGC
AGCTGGAGGAGGACAAGCCTAAGATATTGCCGGGTGCATACACGCCCCTA
ACCGTTCTGGAACTAATCCAACAAGGAATCGATGTGTTTGACACTTCCTA
CGCATATTGTGCTTCTCTAAACTTCAAGGCTTTGTCATTTAGTTTTGTGC
AGATGCAGTGGAGCATGTGCCTTTTCTTGACATAAACGACGAAGCTATCA
AGGAGGATTTTACCTCGCGCTGAGCAACTGCAATTGCTTGACTTGCCAGA
AACACCGCGTGCCTACTTCACCACCTGTACAAGAACACGAACTATTAGGT
CCATCTTATACGATGGTTCTCAACCTTTACACTACTGGCTTCTTGGAAAA
TTCCAGAGAGTGGCCTAGAAT
FMO12829.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:21:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3434-RA | 1372 | CG3434-RA | 83..1182 | 9..1100 | 5090 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:21:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9459669..9460717 | 1052..9 | 4890 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:21:15 has no hits.
FMO12829.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:49 Download gff for
FMO12829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3434-RA | 49..1147 | 1..1091 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:42 Download gff for
FMO12829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3434-RA | 74..1172 | 1..1091 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:32 Download gff for
FMO12829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3434-RA | 74..1172 | 1..1091 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:32 Download gff for
FMO12829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9459669..9460721 | 1..1052 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:42 Download gff for
FMO12829.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9452769..9453821 | 1..1052 | 98 | | Minus |
