FMO12833.5prime Sequence
1102 bp (1021 high quality bases) assembled on 2013-01-29
> FMO12833.5prime
CAGTCGACATGGTACATCCAGGTCATCGACAGAGCCGAGGACTTGCTGAC
TCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAATGAACACACACCACCT
GACCACCTCGCGAACCAATCCGCAGTTCTATATATTCAGTCAGCTCTTTG
GTAACGATTTCGACTGGAATAATTGCAATTGGGGGGGCATTCAAAACGTT
ACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGAGCTGCTCGAGCAAAA
GTGGCACAAGCGGTTTCCCGAATACAAAGATCTTATCGAGGTGGTTTCGT
CGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAGAAGCACGCCAGCGAT
TACAGTGAAAAGTTCTGGTATATATTTAGCTGTGCCTTTGAGAACTACCA
ACACGATTTGGCCAAATCATTTGGCCTTGACGTCGCTGAAAACTCAGAAG
ATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACAAATAAGCCAATAAAA
TCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGACGAATCATACTTGAC
TGCCAACGACGATCCCGAGGATTGTGACGAGGAACAACAGCTGCGCCTTC
TCGGATTGCCAACATCATTTGCGTCGAAGGCAGATATAATTAATTATAGA
AAGGAAAGAAAGACACAGTACGAACTATCTAGCAGCGATAGCGAGGACGA
TCATGATCTGTTGACCATGGAGAACAACGAAAACGAGGCTCTGCACGGCG
TTCAGAGCGGTTCTGTTAAAAAGAAAAAACGACGGCAAAGGCAAATAAAA
AACTCAAGGCCAGGATGCCAGAGTGCATGCAAGAGGATAACAACAAAATG
GTCAAGTACTGGTCAGCGATTCTCGCTGTTCTCCCGCTTCGATCAGGCAT
TCGGCTGGACCGCGAGAGCTGGTTCTCGGTGACACCCGAGAGATTGCCCA
ACAACGGCCCGACGACTGGCTGCGACGTGATCGTAATGCTTTCTGTGGAT
GCGCGCATGCCATTCAGTTTGCAAAACCTGTGGACGCGTATTGCTGTGAA
ATCGATGCGAAAGTGGCAAGGCAGCATATGCCGCATTTATGGGTGGTCAT
AG
FMO12833.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:21:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tgs1-RB | 2089 | CG44890-RB | 545..1650 | 9..1092 | 4945 | 97.7 | Plus |
| moi-RA | 2089 | CG42350-RA | 545..1650 | 9..1092 | 4945 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:21:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18256133..18257176 | 9..1040 | 4635 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:21:38 has no hits.
FMO12833.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:51 Download gff for
FMO12833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tatl-RB | 536..1616 | 1..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:59 Download gff for
FMO12833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tgs1-RB | 536..1616 | 1..1064 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:46 Download gff for
FMO12833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| moi-RA | 536..1616 | 1..1064 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:46 Download gff for
FMO12833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18256124..18257204 | 1..1064 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:59 Download gff for
FMO12833.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14081846..14082926 | 1..1064 | 98 | | Plus |
