FMO12834.5prime Sequence
1115 bp (1018 high quality bases) assembled on 2013-01-29
> FMO12834.5prime
CAGTCGACATGAGTGGAAAACCGTCGAAACCGAGCAGCCCCTCCAGCAGC
ATGCTGTACGGCTCCAGCATCTCGGCGGAGTCCATGAAGGTGATCGCGGA
GAGCATCGGAGTGGGCTCCCTGTCGGATGACGCCGCCAAGGAACTAGCGG
AGGATGTGTCCATCAAGCTGAAGAGGATTGTACAGGATGCGGCCAAGTTC
ATGAACCACGCCAAGCGGCAGAAGCTCTCAGTGCGGGACATCGACATGTC
CCTTAAGGTGCGAAATGTGGAGCCGCAGTACGGTTTCGTAGCCAAGGACT
TCATTCCATTCCGCTTCGCATCTGGCGGAGGACGGGAGCTGCACTTCACC
GAGGACAAGGAAATCGACCTAGGAGAAATCACATCCACCAACTCTGTAAA
AATTCCCCTGGATCTCACCCTGCGCTCCCATTGGTTTGTTGTGGAGGGAG
TGCAACCCACTGTGCCCGAAAACCCCCCTCCGCTCTCGAAGGATTCCCAG
TTACTGGACTCGGTCAATCCAGTTATTAAGATGGATCAAGGCCTAAACAA
AGATGCGGCAGGCAAACCCACCACCGGCAAGATACACAAGCTGAAAAACG
TGGAGACCATTCATGTCAAGCAACTGGCCACGCACGAGTTGTCCGTGGAG
CAGCAGTTGTACTACAAGGAGATCACCGAGGCGTGCGTGGGATCTGATGA
GCCGCGGCGCGGGGAAGCGCTGCAGTCGCTGGGATCCGATCCTGGCCTGC
ACGAAATGCTTCCCCGCATGTGCACCTTCATTGCCGAGGGAGTTAAGGTC
AATGTGGTTCAGAACAACTTGGCGTTGCTTATTTACCTCATGCGCATGGT
TCGTGCGCTTCTGGATAATCCTTCGCTGTTTCTGGAGAATACCTCCACGA
ACTGATACCCTCGGTGATGACGTGCATTGTGTCCAAACAGCTGTGTTTGC
GCCCGAGCTGGACATCACTGGGCCCTGCAGACTTTGCCTCCCGACTGATG
CTCAATCTTGCAGACTTCAATACCCTAGCAAACATCTGCACCGTGTACCC
GCATCTTTCAGCCAGGCCTTGCGACGACAGACCACTGTTCTCCGCTTTAC
GTCTAATGCGTCTCT
FMO12834.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:20:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Taf6-RB | 2053 | CG32211-RB | 73..1180 | 9..1101 | 4960 | 97.6 | Plus |
Taf6-RA | 2056 | CG32211-RA | 73..1180 | 9..1101 | 4960 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:20:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 19599160..19600040 | 9..889 | 4405 | 100 | Plus |
3L | 28110227 | 3L | 19600103..19600217 | 889..1000 | 395 | 95.7 | Plus |
Blast to na_te.dros performed 2014-11-28 18:20:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
rover | 7318 | rover ROVER 7318bp | 1457..1499 | 166..124 | 116 | 74.4 | Minus |
FMO12834.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:44 Download gff for
FMO12834.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf6-RA | 67..1113 | 1..1040 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:53:17 Download gff for
FMO12834.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf6-RA | 66..1112 | 1..1040 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:10 Download gff for
FMO12834.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Taf6-RA | 66..1112 | 1..1040 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:10 Download gff for
FMO12834.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 19599153..19600044 | 1..892 | 99 | -> | Plus |
3L | 19600107..19600254 | 893..1034 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:53:17 Download gff for
FMO12834.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 19592253..19593144 | 1..892 | 99 | -> | Plus |
arm_3L | 19593207..19593354 | 893..1034 | 92 | | Plus |