Clone FMO12841 Report

Search the DGRC for FMO12841

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:128
Well:41
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15093-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12841.5prime Sequence

799 bp (799 high quality bases) assembled on 2013-01-29

> FMO12841.5prime
CAGTCGACATGTCGCTCCGTGTGATGTCCCCCGCTATGCTGAATGCCTGG
AGCCAGACCCTCGTGAGGGCCATGTCCACCCAGGGCGGAGCCAAGAACAT
CGGCTTCGTGGGTCTGGGCAACATGGGTGCCAACATGGCCAGCAATCTAA
TCAAGGCCGGCCACAAGCTGCATGTCTTCGATATCTCCAAGCCCGCCTGC
GATGGTCTGGCCGCCAAGGGAGCCACCGTCTACGCCAAGACCTCGGAGCT
GGCCAAGAACTCGGACTTTGTGATCACCATGCTGCCGAACAATGCCATTG
TGGATGCCTCCTACGATGAGATGACTGCCGATGGCGTCAACAAGGACACC
ATCTTCATTGACTCGTCGACGATCTCGCCGGATTTGGTCAAGTCGTTGCA
GAAGAAGATCAGCGCCAAGGGAGCTCGGTTTATCGATGCCCCCGTTTCCG
GCGGAGTTCCCGGCGCCGAGCAGGCCACCCTCACCTTCATGGTGGGCGGC
ACCGAGGCGGAGTACAATGCCGTCAAGGCCGTCCTAGAGTGCATGGGCAA
GAAGATCACCCACTGCGGCGTCTATGGCATGGGCCAGGCCGCCAAGCTGT
GCAACAACATGATGCTGGCCATCTCGATGATCGGTGTTTCGGAGGCCATG
AATCTGGCGGTGCGCCAGGGTCTCGATGCCCAATGTCTTCGCCGAGATCA
TCAACTCCTCCACCGGACGCTGCTGGGCCTCGGAGATCTACAACCCTGTG
CCCGGAGTCTGCCCCAGTGCCCCAGCCAACAGGGACTACGCCGGCGGTT

FMO12841.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:22:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG15093-RE 1255 CG15093-RE 97..889 6..799 3945 99.9 Plus
CG15093-RA 1310 CG15093-RA 152..944 6..799 3945 99.9 Plus
CG15093-RB 1243 CG15093-RB 85..877 6..799 3945 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 18776035..18776827 799..6 3920 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 18:22:09 has no hits.

FMO12841.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:43:56 Download gff for FMO12841.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 78..875 1..799 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:54:20 Download gff for FMO12841.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 80..877 1..799 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:05 Download gff for FMO12841.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15093-RB 80..877 1..799 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:05 Download gff for FMO12841.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 18776035..18776829 1..799 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:54:20 Download gff for FMO12841.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 14663540..14664334 1..799 99   Minus