FMO12851.5prime Sequence
835 bp (835 high quality bases) assembled on 2013-01-29
> FMO12851.5prime
CAGTCGACATGAACAGCGGCCAGGGGCGCGTCAATCAACTAGGTGGAGTT
TTCATCAACGGTCGTCCTTTGCCCAACAATATTCGTCTTAAAATCGTCGA
GATGGCCGCCGATGGCATTCGGCCCTGTGTGATCTCCAGACAGCTACGTG
TGTCCCATGGCTGCGTATCGAAGATCCTGAATCGCTACCAGGAGACTGGC
TCCATTAGACCAGGCGTAATTGGTGGCTCCAAGCCGAGGATAGCCACGCC
CGAAATCGAGAACCGAATTGAGGAGTACAAGCGCAGTAGCCCGGGCATGT
TCTCGTGGGAGATCAGGGAGAAGCTGATCCGCGAGGGTGTCTGCGACAGG
AGCACAGCACCATCTGTGTCCGCCATATCGCGCCTGGTGCGCGGCCGAGA
TGCTCCATTGGACAATGATATGTCTTCTGCCTCTGGATCTTCTGCGGGTG
ATGGCACCAAAGCATCGAGTTCCTGCGGCTCCGATGTCTCAGGTGGCCAT
CACAACAACGGCAAGCCCTCCGATGAGGACATCTCTGACTGTGAAAGTGA
GCCGGGAATCGCCTTGAAGCGCAAACAGCGCCGCTGCAGGACCACCTTTT
CCGCTTCCCAGTTGGACGAACTGGAACGCGCCTTCGAGCGCACCCAATAC
CCTGATATCTACACCCGTGAGGAGCTGGCCCAGCGCACCAATCTCACGGA
GGCACGCATTCGGTGTGGTTCAGCAATCGGCGTGCTCGTCTCCGCAAGCA
GCACACCTCGGTCTCGGGCGGAGCACCTGGCGGAGCAGCTGCCTCAGTGA
GCCATGTCCGCCGCGTCTCGCTCTTTGCCCAGTGT
FMO12851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:23:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| prd-RB | 2459 | CG6716-RB | 365..1194 | 6..835 | 4045 | 99.3 | Plus |
| prd-RA | 2330 | CG6716-RA | 237..1065 | 7..835 | 4040 | 99.3 | Plus |
| gsb-RA | 1649 | CG3388-RA | 263..495 | 42..274 | 415 | 78.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:23:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12084260..12085089 | 835..6 | 3995 | 99.3 | Minus |
| 2R | 25286936 | 2R | 25063257..25063489 | 42..274 | 415 | 78.5 | Plus |
| 2R | 25286936 | 2R | 25051407..25051609 | 235..33 | 370 | 78.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:23:16 has no hits.
FMO12851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:02 Download gff for
FMO12851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prd-RB | 327..1159 | 1..835 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:01 Download gff for
FMO12851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prd-RB | 362..1194 | 1..835 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:59:36 Download gff for
FMO12851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| prd-RB | 362..1194 | 1..835 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:59:36 Download gff for
FMO12851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12084260..12085091 | 1..835 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:01 Download gff for
FMO12851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12084260..12085091 | 1..835 | 98 | | Minus |
