FMO12862.5prime Sequence
1127 bp (1015 high quality bases) assembled on 2013-01-29
> FMO12862.5prime
CAGTCGACATGACTGCAGAGCTCAAAGCGTCAGATACAGAAATGACGAAG
CCGGAAGAGAGGCATCTGCTGCAGCTGCTTGCGCAACTGGAGAAGGTGCC
GCACCACCAGCTGGAGCAAAAGTTCGTCGCCTATTTTAAAAAGGTTGGCA
AGGGTGATAACCAGAGTAACTGCACACTAGAGGACTTCGCCACCTACTTT
TTAGGTGCACTGCGTCAAAGCACAAAGAGGTACTACTATTCGCAAAACTC
GGAGACACCCGTGTTTCCCTTGACCCCCATCCATCAGCTCAAGCCGCCGG
TCGCCGATGTGGTCAAGGAGGAGGAACAGCAGCAGCTCAATGAGTCCTCG
ATCCTTAGCCGGAGCAGCTGCAGTATGTCCTCCACTTCGAATACTACTCC
GGCTCCCCAGCAGCCGCAGGGCAGAAGATCAACGCCAGGAAGTGGCGCCC
AGTTTTGCAGCACGCCTAACAGAAGCGGCGGTGGGGGAGCAGGAGGAGGG
CACAGCATCTGCTTGGGCAACTTTCTGGTCAATACACCTATCCAGAGCCA
TCAGCGATCTAAGAAGAAGATCACGCCCCAAAAACAGCAGCAAAATCAAC
ATGCATCATTGGGTTCAGGAACTGGAGCTGGAGCCACGCCACAATCCAAG
CCGCGGCGACGTGTCTTACCCATGACCATTAGCAAGAATGTTTCGGCCAG
CTCCTCTTTCGGAGACACCAGTTCCTTTAGCAATGAAAATAACTTTTGGC
GAATCTCGCAGAGCAGCGAAATCTTCGATAGAAGCCAAGAAGCAGCCCTG
GAAATGGAGGCCCGCAAGTTCCTGTTGCTCAAAAAGCAGGAAATCAAAAG
CGAAGCGCCTGTGATGTTAGTCAACAGGAGAGGACACCGAAGATGAGTTT
TCCCTGAGAGCCATTAGCTTGAGGTGTGCTAATGCCAATCACTTGCAGCT
CCTATCAACCATTAAGCCTGTATGAACCTCATTTGGTGCCAACGTACTAC
CTGAACTTAGTTTGTGTCCATCTGCTAAATGTGCGAGATTTGGCCAATCA
CCCGTCCAATCGAAGTACCATGCCTGGAGGACTACCAGCAAAAAGTTGGT
ATACTGCGCAAACGTCTGGAAATCCGA
FMO12862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dlt-RA | 4000 | CG32315-RA | 214..1338 | 7..1105 | 4920 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1792345..1793417 | 1062..7 | 4590 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:24:11 has no hits.
FMO12862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:08 Download gff for
FMO12862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 197..1290 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:34 Download gff for
FMO12862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 207..1300 | 1..1073 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:09 Download gff for
FMO12862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dlt-RA | 207..1300 | 1..1073 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:09 Download gff for
FMO12862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1792335..1793421 | 1..1070 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:34 Download gff for
FMO12862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1792335..1793421 | 1..1070 | 97 | | Minus |
