FMO12863.5prime Sequence
882 bp (312 high quality bases) assembled on 2013-01-29
> FMO12863.5prime
CAATCCACATGGTCATGGATGCGACCCAATCCCATCAGCCTTCGCCGCAA
TCTGTGGGACGCGAGTTTGTCCGCCAGTACTACACGCTGTTGAACAAGGC
GCCCAACCACTTGCATCGCTTCTATAACCACAACTCGTCGTACATCCATG
GAGAGTCCAAGCTGGTGGTCGGTCAACGGGAGATCCACAACCGAATCCAG
CAGCTGAACTTCAACGATTGCCACGCGAAGATCAACCAGGTTGATGCCCA
GGCCACTTTGGGCAACGGTGTGGAGGTTCAGGTCACCGGGAAGCTATCCA
ATGATGGCCAGCCGATGCGACGTTTTACCCAGACGTTCGTTCTGGCCGCT
CAGTCGCCGAAGAAGTACTACGTGCACTACGACATCTTCCGCTATCAGGA
TCTCTACTTCGAGGACGAGCAGGATGGCGAGTCGCGATCGGAGAACGATG
AGGAGCACGATGTGCAGGTCGTCTGTGGCACTGTGGATCAAGCTGTGCAG
GTGGCCGGCGATGTCTTTGCCCAGAAGCCGAAGCAACAGCAAGCTCCTCC
GCAGCCACAGGCTCAGGTCGTGGTGCCCCAGCAGGTAGCTCCTGTAGCGG
CCGGTGGTGCTGCCCCACAACAGATCTTCTACCCATTGACCAGCGGGTGC
TGCCGCCGGACGTCCTGTGTCTGTTTTGCCACCAGCTTCCGCAAGCCGCT
GCTGTTCCACTGCCCGCGTTATTCACCGTACCGCCGGCAACAGCCCATCC
AGAACGGTGTGGTGTCGCACGAAGAGCTGCACTATCATATAGTGCTGGTC
ACCCCAGCGTGTCTCCCCAGATAAGCAGCACCAGCCGAACCGAAAGCCCG
TGTTGCCAATTGATCCATGGTCAATCACGAGC
FMO12863.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:24:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| rin-RG | 5382 | CG9412-RG | 349..1206 | 9..867 | 3565 | 94.7 | Plus |
| rin-RF | 3167 | CG9412-RF | 248..1105 | 9..867 | 3565 | 94.7 | Plus |
| rin-RE | 3501 | CG9412-RE | 582..1439 | 9..867 | 3565 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13649069..13649926 | 9..867 | 3440 | 94.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:24:18 has no hits.
FMO12863.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:08 Download gff for
FMO12863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rin-RC | 728..1565 | 5..842 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:55:37 Download gff for
FMO12863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rin-RB | 343..1180 | 5..842 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:13 Download gff for
FMO12863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| rin-RE | 576..1413 | 5..842 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:13 Download gff for
FMO12863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13649063..13649898 | 5..840 | 95 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:37 Download gff for
FMO12863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9474785..9475620 | 5..840 | 95 | <- | Plus |
