Clone FMO12865 Report

Search the DGRC for FMO12865

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:128
Well:65
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12865.5prime Sequence

557 bp (557 high quality bases) assembled on 2013-01-29

> FMO12865.5prime
CAGTCGACATGTCAGACGAGGACGCTCCCCAAAAGCAAATTCCTTTTGAT
GAACTAGAAATTGTGCACGTGCAAAGCCAGGACACGGTCGGCAATCGGAG
GACGAGACGGTCGAGATGGATGAGTGAGTTCCCGGCCGAGGACTCGGCGC
TCGGCGCTCGGAACAACCCCCAAAAGCAAATGTTGGGGTGTGTCGGAGTT
AACGAGTTCAAATGTATTCATGAGCCGGATCTTACCAGCCAGCTGGCTGC
TATGTGGGAGGTGTCGCATGGGGGAGCCCCAGCCCGCTGCCAAAGTCCTC
CCCCTCTCGAGGATTTGGCTTCCTGCCAGCTGCGAGGGTTGCCTGTGCCT
GTGACTGTTCCATTGCCTTTGCAACCCGACTTTCCTGACTTATTGCCTCG
CGGTCATGTGGGAGGATGTGGCTCGGCTAAAAGGCCCTTCTCTACTCAAT
GTTTTGCAATTTGCAGGTGTTTTCATCATCAATTTCGACCAGCTGTAGAC
ATTTTTGAACAAGCCAACAGGCTCAGGGCAATACATTCGGCAAGCTTTCT
AGACCAT

FMO12865.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 18:24:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 797341..797871 9..539 2595 99.2 Plus
Blast to na_te.dros performed 2014-11-28 18:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
jockey2 3428 jockey2 JOCKEY2 3428bp 70..99 80..51 105 83.3 Minus

FMO12865.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:16 Download gff for FMO12865.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 797341..797871 9..539 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:16 Download gff for FMO12865.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 797341..797871 9..539 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:39 Download gff for FMO12865.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 797341..797871 9..539 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:39 Download gff for FMO12865.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 797341..797871 9..539 99   Plus