FMO12865.5prime Sequence
557 bp (557 high quality bases) assembled on 2013-01-29
> FMO12865.5prime
CAGTCGACATGTCAGACGAGGACGCTCCCCAAAAGCAAATTCCTTTTGAT
GAACTAGAAATTGTGCACGTGCAAAGCCAGGACACGGTCGGCAATCGGAG
GACGAGACGGTCGAGATGGATGAGTGAGTTCCCGGCCGAGGACTCGGCGC
TCGGCGCTCGGAACAACCCCCAAAAGCAAATGTTGGGGTGTGTCGGAGTT
AACGAGTTCAAATGTATTCATGAGCCGGATCTTACCAGCCAGCTGGCTGC
TATGTGGGAGGTGTCGCATGGGGGAGCCCCAGCCCGCTGCCAAAGTCCTC
CCCCTCTCGAGGATTTGGCTTCCTGCCAGCTGCGAGGGTTGCCTGTGCCT
GTGACTGTTCCATTGCCTTTGCAACCCGACTTTCCTGACTTATTGCCTCG
CGGTCATGTGGGAGGATGTGGCTCGGCTAAAAGGCCCTTCTCTACTCAAT
GTTTTGCAATTTGCAGGTGTTTTCATCATCAATTTCGACCAGCTGTAGAC
ATTTTTGAACAAGCCAACAGGCTCAGGGCAATACATTCGGCAAGCTTTCT
AGACCAT
FMO12865.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 18:24:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:24:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 797341..797871 | 9..539 | 2595 | 99.2 | Plus |
Blast to na_te.dros performed 2014-11-28 18:24:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
jockey2 | 3428 | jockey2 JOCKEY2 3428bp | 70..99 | 80..51 | 105 | 83.3 | Minus |
FMO12865.5prime Sim4 Records
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:16 Download gff for
FMO12865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 797341..797871 | 9..539 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:16 Download gff for
FMO12865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 797341..797871 | 9..539 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:39 Download gff for
FMO12865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 797341..797871 | 9..539 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:55:39 Download gff for
FMO12865.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 797341..797871 | 9..539 | 99 | | Plus |