FMO12879.5prime Sequence
506 bp (506 high quality bases) assembled on 2013-01-29
> FMO12879.5prime
CAGTCGACATGGCCGCCTTCATGGAGGAAGCGTTAGTGGAGGCGAGGCGG
GCACGTGACGCCGGCGAGGTGCCCGTGGGCTGTGTGTTCGTTCATGGGGA
CAAGGTGGTCGCACGTGGCGGGAACGAGGTGAACGTCCACCGGAACGCCA
CTCGCCACGCGGAATTCATTTGCATCGACGCTATCCTCGCCAGCTGCCGC
GAGAGACGTCTGCCGGCCCGCCAGCTGTTCAGCGAGATCACCGTGGTGGT
CACCGTGGAGCCCTGCATTATGTGCTCCGCCGCCCTGCACACTCTGGGCG
TCAAGGAGATCATCTACGGCTGTGAGAACGATCGTTTCGGAGGAAAGACG
GTCGTGGATGTGGCCGCCGTCGTTGGCCATAGGATCGAGATCACGGGCGG
TGTGCGGGCGGATGAGGCGATGGCTCTGCTAAAGGATTTCTACAAGGGCG
ACAATCCGGCGGCACCGCCACAGGCCAAGAAGAAAAAGGCAAGCTTTCTA
GACCAT
FMO12879.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5292-RB | 1855 | CG5292-RB | 114..593 | 9..488 | 2400 | 100 | Plus |
CG5292-RA | 1191 | CG5292-RA | 114..593 | 9..488 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17151974..17152453 | 9..488 | 2400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:25:46 has no hits.
FMO12879.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:18 Download gff for
FMO12879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 101..588 | 1..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:31 Download gff for
FMO12879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 106..593 | 1..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:59 Download gff for
FMO12879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 106..593 | 1..488 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:59 Download gff for
FMO12879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17151966..17152453 | 1..488 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:31 Download gff for
FMO12879.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12977688..12978175 | 1..488 | 99 | | Plus |