FMO12884.5prime Sequence
1109 bp (994 high quality bases) assembled on 2013-01-29
> FMO12884.5prime
CAGTCGACATGAGCGACTTTAACAAATATTGCGAAGAAGCTGCGAGGGAA
GCGCTTCCGGACTCGGAAGACGAGGAAGACATCGGCGATGAGGACACTTG
TAGCGCACAGGATCTTGCCGCCGAATTCCAGCTGAAGTACAAGCCGCAGG
ACGAAGTCAGTGTGTCCTTGCAGCGTGAATATGTTCTTAGCCTGGCCGCA
GATCAAGGATTCTCACGGATGGCCGCCGGACTGTCCAATTCAGCAGTGCA
TATCTATAATTTGGATTCGGGCGCCGGGAAACTGGAGAACTTTAGCTATC
TGCCGCCCACAGATTCGCCGCAGAGCGTAAGCATCTGTGGCGTTCGTTTC
CTCGACGAAGGACCACACAACATCCTGGTCGGCACCACCGATGGCTACGT
GCGCCTCTACGATCTGCGGCTAAGAGGCGAACAGGCGCGGTTCAAGTACA
CGCAGCACCCTAATGTGCCTCCGGTGCCCAAATCGCTTTCGTGCTTCGAC
AGAAACGCCAACGGTCGGATTATTTGCTGCGGCACCGAACAGTTTCACAG
CAACGCGTTCCTCGTGTTCTTCGATGTTCGGGAGCGCCAGCAAATGGGCG
TCTACTTCGAAAGCCATGAGGACGATATCACCTCGTTGCGGTTCCATGCC
CAGAATCCAGACCTTCTGGCCACGGGCAGTGTGGACGGGCTAGTAAACGT
GTTCGATGTGAAGGAGCCGGACGAGGATGAAGCACTGCTTAACACCTTCA
ACACGGAGAGCAGTGTGGCCCGGTTGGCGTGCACAGAAACGTCTACGACA
AGGACATCATATCCTGCGTCACGACCACTGGCGATTTCAAGAGCTACGAG
TGCGAGGAGGGCGACGAGGTGGCATCCTTCGAGCGGCCGGATGTTACGCG
GCATAAGAGAAAAAGCCGCAACTTCAACTGATAATGCCCACAATCAGAGA
CGAGAGTCTTTCTGTGGCGGCACACTTCAACAAGGGCGAGATCTGCGCTC
GTAGCGTACTCGAAGAACAGCTTCAGCATGACATTTCAGGGAACAAGCGA
TCGTCGGAATTGTCTTTCGATTCAAGGAAGTTACTTTAAGGCGAAATCCG
CATGTACGG
FMO12884.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:25:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12134-RA | 1526 | CG12134-RA | 252..1350 | 9..1075 | 4675 | 96.7 | Plus |
| CG12134-RB | 1581 | CG12134-RB | 333..1405 | 35..1075 | 4545 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:25:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9971475..9972339 | 35..898 | 4275 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:25:10 has no hits.
FMO12884.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:13 Download gff for
FMO12884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12134-RA | 241..1291 | 1..1035 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:56:07 Download gff for
FMO12884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12134-RA | 247..1297 | 1..1035 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:39 Download gff for
FMO12884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12134-RA | 247..1297 | 1..1035 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:39 Download gff for
FMO12884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9971477..9972443 | 37..986 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:56:07 Download gff for
FMO12884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5858982..5859948 | 37..986 | 98 | -> | Plus |
