FMO12889.5prime Sequence
404 bp (404 high quality bases) assembled on 2013-01-29
> FMO12889.5prime
CAGTCGACATGCTGAAAATAACAAAGATCTGCTTGGCCAGCTCCGCCACA
AGTACAGCTCAGCGAAGCATTGCTCTTACTGCCCCCCGTGCCATTGATCA
GAAGTGGCGTGCAGCCAAGGGATTGCCGGAAAACCCAAATGCCTTTGGCC
CACTCACCAACCTGCCCGACTACACGTACTTAGATGGTAGGCCCACGCCG
CTAGGTGCCAACCAGAAGAGGCGCCTGATTAAGCAGCAGGAGATCGCCAC
CAGGATCGTGGAGCTAAGTGGGGAGCTAGAGTTCGCCAAGCAGCGACATG
AACGCCTTAAGGCAAATGCCGAGTCCGAGAAACAGCGCCTCATCCGCAGC
AAACTGAAGCCCAAGGGCCACTTCCTGCTCAAGAAAGCAAGCTTTCTAGA
CCAT
FMO12889.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:26:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL52-RA | 558 | CG1577-RA | 98..475 | 9..386 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:26:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7673804..7673983 | 386..207 | 900 | 100 | Minus |
2R | 25286936 | 2R | 7674043..7674195 | 207..55 | 765 | 100 | Minus |
2R | 25286936 | 2R | 7674255..7674303 | 57..9 | 245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:26:42 has no hits.
FMO12889.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:24 Download gff for
FMO12889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL52-RA | 101..482 | 9..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:07 Download gff for
FMO12889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL52-RA | 98..479 | 9..392 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:28 Download gff for
FMO12889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL52-RA | 98..479 | 9..392 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:28 Download gff for
FMO12889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7673800..7673983 | 207..392 | 98 | <- | Minus |
2R | 7674044..7674192 | 58..206 | 100 | <- | Minus |
2R | 7674255..7674303 | 9..57 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:07 Download gff for
FMO12889.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3561305..3561488 | 207..392 | 98 | <- | Minus |
arm_2R | 3561549..3561697 | 58..206 | 100 | <- | Minus |
arm_2R | 3561760..3561808 | 9..57 | 100 | | Minus |