FMO12911.5prime Sequence
542 bp (542 high quality bases) assembled on 2013-01-29
> FMO12911.5prime
CAGTCGACATGTCAGCCAAATATACACTGATCTTTGCCCTGGCGGCTCTC
TGCTGTCTGGTGTTCTCCACCGAGGCGGCGGCCCAGCGCAGCCGAGTTCT
CAGCTCTCGCCGTGGCTCCGAGCTGGTCGAGAAGACGTCGGACAACAAGG
AAGACTCCGAGCTGGCCGCCCAGGAGCAAGACCTGGAGCGCCAGGAGCAG
GAGGAGCAGAATGACAGACTGGAGGGACGCAGCGATGATGTTGCCGAGGG
CAGCGACAACAAAGAGGACAAGGAGACCGCCACCAACAACAAGGACACCA
TCGTGAAGCCCAACAAGGATGACGCCCGTGCCCGCCGCATCGTTCGTGCC
GGTCGTCGTCGTGGTGGACGCCGCGGTGGTCGCCGTGGAGGTCGTCGTAG
TGCACGCAAATCCGTGCGCCGTGGCGGACGACGAGGTGGACGCAGGCGCG
GTGGACGACGTGGTCGTGGCGGTGCTCGCCGTCGCACCTCCGTGAAGAGG
CGTTCCGGCAAGGGCAACAAGGCCGCAAGCTTTCTAGACCAT
FMO12911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31813-RB | 893 | CG31813-RB | 52..571 | 5..524 | 2585 | 99.8 | Plus |
| CG31813-RA | 653 | CG31813-RA | 52..571 | 5..524 | 2585 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13736189..13736708 | 5..524 | 2585 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 18:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 3493..3538 | 162..117 | 113 | 71.7 | Minus |
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 7555..7693 | 469..337 | 106 | 55.7 | Minus |
FMO12911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:27 Download gff for
FMO12911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31813-RA | 47..573 | 1..529 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:30 Download gff for
FMO12911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31813-RA | 49..575 | 1..529 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:48 Download gff for
FMO12911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31813-RA | 49..575 | 1..529 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:48 Download gff for
FMO12911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13736186..13736714 | 1..529 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:30 Download gff for
FMO12911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13736186..13736714 | 1..529 | 98 | -> | Plus |
