FMO12912.5prime Sequence
1093 bp (999 high quality bases) assembled on 2013-01-29
> FMO12912.5prime
CAGTCGACATGCACTGGTACGACGAATACAAGCACATCGGTTACGACTGG
GATGCCAAGAAGATTATTAAACCACCACAAGGAGATCAAATTGATGAGTT
CCTGCGTAAGATCGAGGACCCAGACTTTTGGCGTACCGTCAAGGATCCAC
TTACCGGTCAGGATGTGCGCCTAACAGACGAGGACATTGCTCTGATCAAG
CGCATCGTTTCGGGTCGCATACCCAACAAGGATCACGAAGAGTATGAGCC
CTGGATCGAATGGTTCACATCGGAGGTGGAAAAGATGCCCATCAAGAACG
TACCCGACCACAAACGCTCTTTCCTGCCCTCAGTTTCCGAGAAAAAGCGC
GTCTCTCGCATGGTGCACGCCCTCAAAATGGGCTGGATGAAGACCACTGA
GGAAGTGGAACGCGAGAAGCAGGCCAAGCGCGGTCCCAAGTTCTACATGC
TGTGGGAAACGGACACCAGTCGGGAACACATGCGCCGCATCCACGATCCA
GTCTCTGCGCCCAAACGCGACCTTCCCGGTCATGCCGAGTCCTACAATCC
ACCGCCAGAGTATCTTTTCGATGCCAAGGAGACCAAGGAGTGGCTTAAAC
TAAAGGACGAGCCACACAAGCGCAAGCTGCACTTCATGCCACAGAAGTTC
AAGTCGCTGAGGGAGGTGCCCGCATACTCGAGATACCTTCGGGAGCGTTT
CCTTCGTTGCCTGTATCTTTACCTGTGTCCCCGTGCAAAGCGTGTCAAGC
TGAACATCGATGCCGAGTACCTTATCCCCAAGTTGCCCTCGCCGCGTGAC
CTGCAACCCTTTCCCACGGTGGAGAGTATGGTTTACCGTGCCACACCGAT
CTGGTGCGGTCTGTTAGTGTGAGCCAAGGAGAGTACCTCGTCTCCGGTTC
GGATGATAAACCGTCAAGATTTGGAAATTGCAACAGGTCGTTGCATTCGC
ACAATCGAGACCGACGAGTGGTACGCTGTGTGGCTTGGTGTTCAAATCCC
AAGCTGTTTATTTATGGCGGTGCCACTGCCATCCGCTGCTGCTCGTCAAT
CTAAAGTGGGGCGAATCGTGCTTGTGAAAAGAATCGACGATCT
FMO12912.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5033-RA | 2514 | CG5033-RA | 569..1663 | 8..1093 | 4950 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17790317..17791223 | 8..910 | 4340 | 99.3 | Plus |
| 2R | 25286936 | 2R | 17791301..17791431 | 923..1051 | 390 | 90.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:27:25 has no hits.
FMO12912.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:28 Download gff for
FMO12912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 550..1629 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:57:33 Download gff for
FMO12912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 563..1642 | 1..1072 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:49 Download gff for
FMO12912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5033-RA | 563..1642 | 1..1072 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:49 Download gff for
FMO12912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17790311..17791233 | 1..919 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:57:33 Download gff for
FMO12912.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13677816..13678738 | 1..919 | 98 | -> | Plus |
