FMO12916.5prime Sequence
350 bp (350 high quality bases) assembled on 2013-01-29
> FMO12916.5prime
CAATCCACATGAAATTCACTATTGCCATCGCCTTCTCCTGTATCCTTGCC
TGCTCACTGGCCGCTCCTCCAGCCATCCAGCAGGATGCTCAGGTGCTGCG
CTTCCACAGCGATGTCCTGCCCGAGGGCTACAAGTTTGCCGTGGAGACGA
GCGACGGAAAGTCGCATCAGGAGGAAGGCCAGCTGAAGGACGTGGGCACC
GATCACGAAGCAATTGTTGTCCGCGGATCCTATGCCTATGTCGGTGACGA
TGGTCAGACCTACAACATTCAGTACCTGGCCGATGATAACGGCTTCCAGC
CCGAGGGTGCCCATCTGCCCAGGCCCGTTCAGGCAAGCTTTCTAAACCAT
FMO12916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Lcp65Ad-RB | 616 | CG6955-RB | 75..398 | 9..332 | 1560 | 98.8 | Plus |
Lcp65Ad-RA | 521 | CG6955-RA | 75..398 | 9..332 | 1560 | 98.8 | Plus |
Lcp65Ac-RA | 505 | CG6956-RA | 191..402 | 110..321 | 385 | 79.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6143691..6143883 | 140..332 | 935 | 99 | Plus |
3L | 28110227 | 3L | 6143469..6143599 | 9..139 | 625 | 98.5 | Plus |
3L | 28110227 | 3L | 6145111..6145290 | 142..321 | 315 | 78.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:28:38 has no hits.
FMO12916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:36 Download gff for
FMO12916.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lcp65Ad-RA | 59..390 | 1..336 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:19 Download gff for
FMO12916.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lcp65Ad-RA | 71..402 | 1..336 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:34 Download gff for
FMO12916.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Lcp65Ad-RA | 71..402 | 1..336 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:34 Download gff for
FMO12916.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6143465..6143599 | 1..139 | 95 | -> | Plus |
3L | 6143691..6143887 | 140..336 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:19 Download gff for
FMO12916.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6136565..6136699 | 1..139 | 95 | -> | Plus |
arm_3L | 6136791..6136987 | 140..336 | 97 | | Plus |