FMO12917.5prime Sequence
1150 bp (1012 high quality bases) assembled on 2013-01-29
> FMO12917.5prime
CAGTCGACATGTCACTGCGTGCGCTTCGGAAAAGAGAAACAGGCACTGGC
TACGGCAACAATAACAACCATTTAGCAGCACCAGCAAGAACTTCACAAGC
AACGCTCTTTAAGAAGGCCAGCACAGCAATAACGTCACCGAAGAAATCGT
TGCTCAAAACTGGGAACTCCGTCTGCGGATTGGACAAACGGAGCCAGTTC
CGGGAGCAGAAGCTACTCGGTCGCAAGTGCCACTCGAGTCCTGACCTACG
ACAAATCGGAAAATACCAAAACAACAGCCTGTTGCGCAGCAAATCGGAGG
GGGATGTTAGTTTAATCCTGGCCAGTAACTCCGGTGCTCCATTGACGGTG
GCAAACGCCAAGTCAGAGGTTTGCCTGCAAAGGATTAGCTCTCACAGTTA
CGAACAATCTCCGAGAACGCCGATAAACAAAAGCGAAATGCTCGGCGGTG
CACGTTCCCATCGCGACCTGACGCAGTCGTCCTATGGCAACCAGGCAGGT
GGACATTCCGTGGATTTGGAATCCAGGTCTAGAACTCCTCGGCGGATGAG
CGAGTGCAGCTTGGGCTACAGCCAATCCAGCTCCCGGCACACTGGCTCCA
ACTCTATGTTCGCCAGCCAGATGACTCTCTCCTCGGGATCGGTGGTGCCG
CCCGTGGACCCCAACGCTGTGCTAAGGGTGCCCATTATTGGTTACGAGGT
TATGGAGGAACGTGCGCGTTTCACTGCCTACAAGCTGCGAGTCGAGAATC
CGGAGACCAACGACTATTGGCTTGTTATGCGACGCTACACCGACTTCGTG
CGGCTCAATAGCAAGCTAAAGCAGGCTTTTCCCAACCTTACGCTCATGCT
GCCCCGGAGAGCTTTTCGGCGATAACTTCAATGCCGTCTTTCTCGACATC
GGGTGCAAGGTCTGCAGATTTTCGTCACTCAGTGATGGCACGAGAGCTGC
GAAGTGCAACTGGTTCGGGAGTTCTTCTGCTGACGAGCCGCCTTCGTACT
CTGATTCCATGGAGGGTGTCGTTGCAATTTCGAAGCTCAGAGGAGACACG
AGCATTCTGAAGCTGCGATTCGAATAAACGATTCTCATCTCTCAGTTGCC
ACGAAACTGGCCGAGGAAATGACGGAAATGAGGCCCTGAAGAGCTAGAAA
FMO12917.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snx16-RA | 1699 | CG6410-RA | 124..1255 | 9..1122 | 4910 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17725707..17726724 | 1015..9 | 4555 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:28:45 has no hits.
FMO12917.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:37 Download gff for
FMO12917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6410-RA | 72..1148 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:25 Download gff for
FMO12917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snx16-RA | 119..1195 | 1..1066 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:38 Download gff for
FMO12917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snx16-RA | 119..1195 | 1..1066 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:38 Download gff for
FMO12917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17725699..17726728 | 1..1022 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:25 Download gff for
FMO12917.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13613204..13614233 | 1..1022 | 98 | | Minus |
