FMO12920.5prime Sequence
263 bp (263 high quality bases) assembled on 2013-01-29
> FMO12920.5prime
CAGTCGACATGAAATTCTTGATTTTCTGTCTGATTGCTCTGTTTGCCATA
GCCTCGGCGCGTCCCCAGTTCGGATTCGGCGGATTTGGTGGCGGGCTTGA
GCAGCAGCAACAGCAGGGCGGTTTTGGACAAGGATTCGGTGGTTTCGGTT
CCTTTGGACAGCAGCAACAGCAGGAAAGTTTTGGCGGAAATGGAAACTTT
GGTCAGCAGCAACAAGAGTTTGGTGGTTTCGGCGGTTTTTACGGTGCAAG
CTTTCTAGACCAT
FMO12920.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4440-RB | 538 | CG4440-RB | 84..320 | 9..245 | 1185 | 100 | Plus |
| CG4440-RA | 384 | CG4440-RA | 84..320 | 9..245 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16330078..16330303 | 20..245 | 1130 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:28:59 has no hits.
FMO12920.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:38 Download gff for
FMO12920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4440-RA | 77..321 | 4..249 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:31 Download gff for
FMO12920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4440-RA | 79..323 | 4..249 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:43 Download gff for
FMO12920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4440-RA | 79..323 | 4..249 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:43 Download gff for
FMO12920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16330074..16330306 | 15..249 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:31 Download gff for
FMO12920.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16330074..16330306 | 15..249 | 98 | | Plus |
