FMO12923.5prime Sequence
662 bp (662 high quality bases) assembled on 2013-01-29
> FMO12923.5prime
CAGTCGACATGGATCGGAGAGTGACTGCGATTGGTTTGGTTATCCTGCAG
CTGCTGGTCAGCGGCCTCTGTTTCCAGGAGAAGGCGCCACTGCAGACGAG
CCTGGTCAGCGGACAGGCCAGGACCGAAAAGCAGCAACAGGTGCTGGACG
ATCCGCTGGGAAGTGGACGCGGGATTGACGAGCACCTGCTGAAGACCATT
GAGGATCAGCAGCACCCACGGCAGTATGGCTATCCACCGCAGTGGTCGCC
AGGACCGCCCGCTTATCCGCCGCCACCGCAGCGTCCTTGGGGGCCACCCC
CTCCGCCCGGACCACCGCCGCCAGGACCTCCTCCTCCGCCGGGACCCTAC
TACAATCCCTACTACAATGGCTACAACTACTACGGCGGATATGGCGGCTA
TGGATATGGGGGCTTTGGATATCCCGGCTTTGGCGGCTATTCTGGCTATC
CCTACTATCCCTTCTATCGCTCCTCGACGGCTGGCGAGGTCGATAACCAA
CTTCCCGGTGCCGATGGACTCACTTCCGCCGCCATTCCTGGCGTTTTCCA
GGGCAGGGCCGTGCTGTCCCACCAGAACTTCCTCGACGGCAGGAACAACG
CTAACGTTGTGCCACTTTATCACCTACTCCAAATGGCCAGGGCTGCAAGC
TTTCTAGACCAT
FMO12923.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9184-RB | 876 | CG9184-RB | 24..660 | 8..644 | 3185 | 100 | Plus |
| CG9184-RA | 966 | CG9184-RA | 307..750 | 201..644 | 2220 | 100 | Plus |
| CG9184-RA | 966 | CG9184-RA | 24..217 | 8..201 | 970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:28:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1322008..1322451 | 644..201 | 2220 | 100 | Minus |
| 3L | 28110227 | 3L | 1322541..1322703 | 201..39 | 815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:28:28 has no hits.
FMO12923.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:44:35 Download gff for
FMO12923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RB | 13..668 | 1..656 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:58:13 Download gff for
FMO12923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RB | 17..672 | 1..656 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:29 Download gff for
FMO12923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9184-RB | 17..672 | 1..656 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:29 Download gff for
FMO12923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1321996..1322450 | 202..656 | 98 | <- | Minus |
| 3L | 1322541..1322702 | 40..201 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:58:13 Download gff for
FMO12923.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1321996..1322450 | 202..656 | 98 | <- | Minus |
| arm_3L | 1322541..1322702 | 40..201 | 100 | <- | Minus |
