Clone FMO12926 Report

Search the DGRC for FMO12926

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:129
Well:26
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12926.5prime Sequence

1092 bp (997 high quality bases) assembled on 2013-01-29

> FMO12926.5prime
CAGTCGACATGTATAATATATATGTGCTTAAAAAGCGACTGGCATACATT
ATTTCTCGTCATACATATATGTATATGCTCAAAAAACGTAATGGCAATGG
GCCATTTACCTTTAGTTTTGCAGGCATGGAAAGTCCCTGTGAATCCGAAA
GTTCGCTGGACGGCGGCACCATGCTGCCACCAAGCCCAGTTTCCCGGGAG
CAGCTCCAGAAGAGGATCGAATCGCTTACCCAGCAGAACAAGGTGCTGAA
AGCCGAACTGGATACCTTCAAGACCAAGTGCAAAGTGGTGCAAGAGGAGA
ATCGCTGCCTCAAGCAAGCCTCAGTCATCATTCAAGCCAAAGCCGAGCAG
GAGGAAGAATACATCTCAAACACGCTGCTAAAAAAGATTCAGGCCCTCAA
AAAGGAGAAGGAGACTCTGGCGCACCACTACGAGCGCGAGGAGGAGTGTC
TGACCAACGATCTCTCCCGGAAGCTCGACCAGCTGCGTCAGGAGAAGTGC
AAGCTGGAGCAGACACTTGAGCAGGAGCAGGAGTGCCTCGTCAACAAGCT
TATGCGCAAGATTGAGAAGCTCCAGGCGGAGACGGACAACAAGCAGACCA
ATCTCGAGCAGCTGCGCCGCGAAATGGTCGAGTTGGAGAACACGCTTGAG
CAGGAACAGGAAGCTCTTGTAAACAAGCTGTGGAAGCGCATGGACAAGCT
GGAGACCGAGAAGCGTTCGCTGCAAATCAAGCTGGATCAGCCGGTTTCCG
ATCCGACTACGCCGCGAGACATCACAAACAACGCCCATGCCAATGGTGGC
GATACGGCCACCAGTTTGAGTGCTCATATCCAGATTCTGCGCTCCGAAGT
GCTTCGCTATCGCTCCGACCTGGCGAGCGCTCAGAAGGAAGCCACTATCA
AAACACAGCAGTATGCGCAGGAAGAGAGTCGATTCGCGAGGAAAACCCCT
CCGCCTTTCAGCGCAGCTAAAGCAGGAGGTGGAAGCGCCCCGAAGCCCTA
TGCTGCACCCTCTTCGAATCGGAATCCTTCCGCTGGAGATGAACGAGAAA
GCTTTCTTACAACGAGACCTTGATTGCGAGGGCGCTCGTTGC

FMO12926.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:32:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG6664-RA 2482 CG6664-RA 308..1263 114..1074 4345 97.5 Plus
CG6664-RB 2552 CG6664-RB 380..1333 116..1074 4335 97.5 Plus
CG6664-RC 2603 CG6664-RC 436..1384 121..1074 4310 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:32:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17014194..17014904 1047..333 3120 97.6 Minus
3L 28110227 3L 17015140..17015373 242..9 1110 98.3 Minus
3L 28110227 3L 17014987..17015077 332..242 455 100 Minus
Blast to na_te.dros performed on 2014-11-28 18:32:57 has no hits.

FMO12926.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:18 Download gff for FMO12926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6664-RD 403..1450 1..1054 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:34 Download gff for FMO12926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6664-RA 306..1263 109..1074 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:31 Download gff for FMO12926.5prime
Subject Subject Range Query Range Percent Splice Strand
CG6664-RA 306..1263 109..1074 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:31 Download gff for FMO12926.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 17015141..17015378 1..241 96   Minus
3L 17014186..17014904 333..1054 97 <- Minus
3L 17014987..17015077 242..332 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:34 Download gff for FMO12926.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17007286..17008004 333..1054 97 <- Minus
arm_3L 17008087..17008177 242..332 100 <- Minus
arm_3L 17008241..17008478 1..241 96   Minus