FMO12926.5prime Sequence
1092 bp (997 high quality bases) assembled on 2013-01-29
> FMO12926.5prime
CAGTCGACATGTATAATATATATGTGCTTAAAAAGCGACTGGCATACATT
ATTTCTCGTCATACATATATGTATATGCTCAAAAAACGTAATGGCAATGG
GCCATTTACCTTTAGTTTTGCAGGCATGGAAAGTCCCTGTGAATCCGAAA
GTTCGCTGGACGGCGGCACCATGCTGCCACCAAGCCCAGTTTCCCGGGAG
CAGCTCCAGAAGAGGATCGAATCGCTTACCCAGCAGAACAAGGTGCTGAA
AGCCGAACTGGATACCTTCAAGACCAAGTGCAAAGTGGTGCAAGAGGAGA
ATCGCTGCCTCAAGCAAGCCTCAGTCATCATTCAAGCCAAAGCCGAGCAG
GAGGAAGAATACATCTCAAACACGCTGCTAAAAAAGATTCAGGCCCTCAA
AAAGGAGAAGGAGACTCTGGCGCACCACTACGAGCGCGAGGAGGAGTGTC
TGACCAACGATCTCTCCCGGAAGCTCGACCAGCTGCGTCAGGAGAAGTGC
AAGCTGGAGCAGACACTTGAGCAGGAGCAGGAGTGCCTCGTCAACAAGCT
TATGCGCAAGATTGAGAAGCTCCAGGCGGAGACGGACAACAAGCAGACCA
ATCTCGAGCAGCTGCGCCGCGAAATGGTCGAGTTGGAGAACACGCTTGAG
CAGGAACAGGAAGCTCTTGTAAACAAGCTGTGGAAGCGCATGGACAAGCT
GGAGACCGAGAAGCGTTCGCTGCAAATCAAGCTGGATCAGCCGGTTTCCG
ATCCGACTACGCCGCGAGACATCACAAACAACGCCCATGCCAATGGTGGC
GATACGGCCACCAGTTTGAGTGCTCATATCCAGATTCTGCGCTCCGAAGT
GCTTCGCTATCGCTCCGACCTGGCGAGCGCTCAGAAGGAAGCCACTATCA
AAACACAGCAGTATGCGCAGGAAGAGAGTCGATTCGCGAGGAAAACCCCT
CCGCCTTTCAGCGCAGCTAAAGCAGGAGGTGGAAGCGCCCCGAAGCCCTA
TGCTGCACCCTCTTCGAATCGGAATCCTTCCGCTGGAGATGAACGAGAAA
GCTTTCTTACAACGAGACCTTGATTGCGAGGGCGCTCGTTGC
FMO12926.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:32:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6664-RA | 2482 | CG6664-RA | 308..1263 | 114..1074 | 4345 | 97.5 | Plus |
CG6664-RB | 2552 | CG6664-RB | 380..1333 | 116..1074 | 4335 | 97.5 | Plus |
CG6664-RC | 2603 | CG6664-RC | 436..1384 | 121..1074 | 4310 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:32:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17014194..17014904 | 1047..333 | 3120 | 97.6 | Minus |
3L | 28110227 | 3L | 17015140..17015373 | 242..9 | 1110 | 98.3 | Minus |
3L | 28110227 | 3L | 17014987..17015077 | 332..242 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:32:57 has no hits.
FMO12926.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:18 Download gff for
FMO12926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6664-RD | 403..1450 | 1..1054 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:34 Download gff for
FMO12926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6664-RA | 306..1263 | 109..1074 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:31 Download gff for
FMO12926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6664-RA | 306..1263 | 109..1074 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:31 Download gff for
FMO12926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17015141..17015378 | 1..241 | 96 | | Minus |
3L | 17014186..17014904 | 333..1054 | 97 | <- | Minus |
3L | 17014987..17015077 | 242..332 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:34 Download gff for
FMO12926.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17007286..17008004 | 333..1054 | 97 | <- | Minus |
arm_3L | 17008087..17008177 | 242..332 | 100 | <- | Minus |
arm_3L | 17008241..17008478 | 1..241 | 96 | | Minus |