FMO12931.5prime Sequence
242 bp (242 high quality bases) assembled on 2013-01-29
> FMO12931.5prime
CAGTCGACATGGGCTGTGCACCGGGCGGACCTTGCTGCGGACCCTGTGGA
CCGTGTTGCGGACCCTGTTGTGGACCCTGTTGTGGACCCTGTTGTGGACC
CTGTTGTGGACCTTGCGGGCCCTGCTGTGGCCCCTGTGGACCTCGTTGTG
GCCCTTGCGGACCCTGTGGACCGTGCTGTGGCACTATGGAAAAACGAAAT
GGCCTTCAGCGGTGCTGTCCTTTTGCAAGCTTTCTAGACCAT
FMO12931.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mst84Dd-RA | 415 | CG17935-RA | 104..321 | 7..224 | 1090 | 100 | Plus |
| Mst84Dc-RB | 359 | CG17945-RB | 87..196 | 33..142 | 215 | 80.5 | Plus |
| Mst84Dc-RA | 363 | CG17945-RA | 91..200 | 33..142 | 215 | 80.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7363401..7363618 | 224..7 | 1090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:33:22 has no hits.
FMO12931.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:20 Download gff for
FMO12931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst84Dd-RA | 104..326 | 7..231 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:59:49 Download gff for
FMO12931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst84Dd-RA | 104..326 | 7..231 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:43 Download gff for
FMO12931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mst84Dd-RA | 104..326 | 7..231 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:43 Download gff for
FMO12931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7363396..7363618 | 7..231 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:59:49 Download gff for
FMO12931.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3189118..3189340 | 7..231 | 98 | | Minus |
