FMO12941.5prime Sequence
515 bp (515 high quality bases) assembled on 2013-01-29
> FMO12941.5prime
CAGTCGACATGAGCGGCTCGCAATTATTCCCAGTGAATCTGAACAACCTG
AGTGCCAAGGAGCGACACAACTATATACTTAGTAATTACGTGCTTAACCT
ACCGAATGAGACGGAATCACGTCGGCACAAGCGAGACATCGATGTAATCC
GAGAGAATCACCGCTTCCTGTGGGAGGACGACGAGTTGGATAGCGACACC
CTAAGCTGGGAGCAGCGCTTGGCCCTGCGATACTACAGGAAGCTATTTAA
GGAGTACTGCATCGCGGACCTGTCCCGCTACAAGGAGAACAAGATAGCGC
TGCGCTGGCGAACGGAGCAGGAGGTGGTCACCGGAACCGGGCAGTTCCAG
TGCGGCAGCCGGCATTGCGGGGAGCGGGATAATCTGCGCAGCTGGGAGGT
AAACTTTAGGTATATCGAAAAGGGTGAGCCCCTAAATGCGCTGGTCAAGG
TGGGTTCCAAATGGGTTTCCGCGATTGTGTCACTAATGGGAATTCCAGCA
AGCTTTCTAGACCAT
FMO12941.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16890-RC | 1179 | CG16890-RC | 24..467 | 9..452 | 2220 | 100 | Plus |
| CG16890-RA | 831 | CG16890-RA | 24..467 | 9..452 | 2220 | 100 | Plus |
| CG16890-RD | 1184 | CG16890-RD | 53..472 | 33..452 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13782949..13783437 | 497..9 | 2445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:34:09 has no hits.
FMO12941.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:25 Download gff for
FMO12941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16890-RB | 17..509 | 1..497 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:23 Download gff for
FMO12941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16890-RA | 20..467 | 1..452 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:12 Download gff for
FMO12941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16890-RA | 20..467 | 1..452 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:12 Download gff for
FMO12941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13782949..13783441 | 1..497 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:23 Download gff for
FMO12941.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13782949..13783441 | 1..497 | 99 | | Minus |
