FMO12948.5prime Sequence
623 bp (623 high quality bases) assembled on 2013-01-29
> FMO12948.5prime
CAGTCGACATGGCCACCAGCGAGATCTCGAGCTCCAATGAGCGGCACTAC
TACGCCAAACTGGAGGCCATCAAGGACATCAGGGACAAGACGCTGTCGCT
GGAGAAGCTCAAAGTGCGGATCATCAAGGAGGTGAAGCTGAGCGACGACG
AGGAGAAGTGCCTGGAGGAGTACCGCAAGGAGATGGAGCACCTGCTCGAG
GAGAAGATGTCGCACGTGGAAGAGCTGCGCCAGATCCACGCGGACATCAA
CGACATGGAGAACATCATCAAGCAGACGAAGGAGAACCAGACCCGCTCCT
TCGACATGGCCAACCGGGTGTACGAGGAGTACCTGGCCCTGAAGTACCAG
ATTGATCACATGCGCCGCGACTATCTCGGACTAAGCCCGCTGCGAGATCT
GCACGAGGAGGAGGGCAGTCCCATTTCGAAGGATCGCTTCCATACTAACT
TCCTTAAGGTGGCCGCCCAGTCGGCGGCAGCAGCAGCTGCTGCAGCTGCG
GCGGCGGCCTCGGTTAATCAGAACTCGTCGTTGGCCCGTCCGCATGCCCG
GCATCCTCTGATGCCGGAGGCCACGGTCACCGCGCTGCCTTCTGGCGGCG
GACAGGGCGGCGTTGGTGGTGGC
FMO12948.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13001-RA | 1786 | CG13001-RA | 290..904 | 9..623 | 3045 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16941968..16942582 | 623..9 | 3045 | 99.7 | Minus |
Blast to na_te.dros performed 2014-11-28 18:33:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G5 | 4856 | G5 G5_DM 4856bp | 530..655 | 224..98 | 110 | 55.1 | Minus |
FMO12948.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:23 Download gff for
FMO12948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13001-RA | 273..895 | 1..623 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:09 Download gff for
FMO12948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13001-RA | 273..895 | 1..623 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:20:59 Download gff for
FMO12948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13001-RA | 282..904 | 1..623 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:20:59 Download gff for
FMO12948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16941968..16942589 | 1..623 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:09 Download gff for
FMO12948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16836001..16836622 | 1..623 | 99 | | Minus |
