FMO12960.5prime Sequence
737 bp (737 high quality bases) assembled on 2013-01-29
> FMO12960.5prime
CAGTCGACATGGCTCAGGTTAAACCGAAAAGTAACAAACAGAGCGGCAAA
CCAGTGCCGGCCGCCAAAAAGAGCGTCCAAGAGAAGAGCAGCGCGCAGCA
GAAGAAGAACAAACAGAAGGCCGCGGCAGAAAAAAAGAAATGCGGATGCT
GCAAGTGGACCTTGGGTAGCATCTTCATCATCGCCCTGATTGCCGGAGCT
CTGTACTACGATACCGAGGTGAACGGCAAGGGCGTGTTCGAGAAATCGGC
CACCGGCAAGGTGCTGAAAAATGCCGGAGTCCTGCCGCATGTCCAGAAGT
CCTGGTACACGGTCATGGGGGCCGGAGCGCGGGGCTACAAGTGGGCGGAA
GTGAATGTGCCGCCGTACGCCGAGCCGGTGATCAAGACCACCTGTGACCT
GTGGAAGCTGGCGAGGAATGCGGCCTGCAACGCTTACCAGAACGGCAAGG
GATACTTTGGCGCCAAATGGCCCGTTGTGGCAAAGTTCATTGACCAATAC
GTGCCCAATTCGTCTGGCAAAATCGAAGCTTTTGCCGCTGGCGTTAGCGA
TTTAGCCGCCAGCAGCTATGAAAAGGCTGCAGCGCTCATCAAGGAAAAGG
TGCTTGTTGGCCGTCTCTCGCCCGAGAACATCAATCAGGCGCTGAACCAG
ACGCGTAACGCCGCCCTGGAGTACTACAACCAGTTTCACAAAAAGGTCGA
CGCATACGCCAAGCTCAAAGCAAGCTTTCTAGACCAT
FMO12960.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:34:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33129-RH | 1661 | CG33129-RH | 248..958 | 9..719 | 3555 | 100 | Plus |
CG33129-RG | 1782 | CG33129-RG | 369..1079 | 9..719 | 3555 | 100 | Plus |
CG33129-RC | 1473 | CG33129-RC | 60..770 | 9..719 | 3555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:34:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10965993..10966411 | 488..70 | 2095 | 100 | Minus |
2L | 23513712 | 2L | 10965792..10965910 | 607..489 | 595 | 100 | Minus |
2L | 23513712 | 2L | 10965608..10965719 | 719..608 | 560 | 100 | Minus |
2L | 23513712 | 2L | 10966502..10966564 | 71..9 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:34:52 has no hits.
FMO12960.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:29 Download gff for
FMO12960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33129-RA | 131..841 | 9..719 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:00:51 Download gff for
FMO12960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33129-RC | 60..770 | 9..719 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:21:35 Download gff for
FMO12960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33129-RC | 60..770 | 9..719 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:21:35 Download gff for
FMO12960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10966502..10966564 | 9..71 | 100 | | Minus |
2L | 10965608..10965719 | 608..719 | 100 | <- | Minus |
2L | 10965792..10965910 | 489..607 | 100 | <- | Minus |
2L | 10965993..10966409 | 72..488 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:00:51 Download gff for
FMO12960.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10966502..10966564 | 9..71 | 100 | | Minus |
arm_2L | 10965608..10965719 | 608..719 | 100 | <- | Minus |
arm_2L | 10965792..10965910 | 489..607 | 100 | <- | Minus |
arm_2L | 10965993..10966409 | 72..488 | 100 | <- | Minus |