FMO12965.5prime Sequence
839 bp (801 high quality bases) assembled on 2013-01-29
> FMO12965.5prime
CAGTCGACATGCTGTTGCCGGAGCTGCTGCTACTCGGCTTGGCCGTCTCC
CTGGCGGACAGCTACGACCGAAGCGTCAACTACTGGGAGGCCTTTGCGCC
CGGCAAGCTGCTCCAGCGCCTGGACGCTCTCACCGTCACGGATGTGGACC
AATCGAAGGTGGTCAAACTGCCGCAGTTGATGCAGCCCATCCTGCCAGCC
AACGAAGCGCAGGCCAAGGTGGATGAGGACGTGGACGTGGATGTTGAGAC
GGATGCAGAGGCGGCGGCCGTTGACGATGTGGACAGCCTTAGTGCGGAGA
CCAGCCACGAGGGCTACTCCGGCGAGGACAACTACGAGCGCAACTACGAG
CAGTTCGTCAAGGAGTACTTCGATCGGGCTGCCGACGACGATGACCACGA
CGAAGGCGAAGGCCTGGTGGAGGAGGAGGAGGAGGAGACTTTTTGCGGAG
GCCACCAATGTCAGGGATCAGCGCTGCCGGCAGGTCAAACGGAAGGATGG
CCAGCTGTGCGAGATCTGTCGCCAGTTGAAGAACAACGAGGTGTCCGAAA
CGTGTAGCTACTCGCACGACGACCCAACCGCAGCAGTACGCCCTATGGCA
GCGGCAGCCAGTACAAGCGTTACCGCGACGATCCCCGCACAGAAGGCGGA
TCAGGAGCAGGCCGAGCCCGGTGGCGCCCAGCAGCCTGTGCGTGCGCCGC
CAGCAGAAGACCAGCGTCTGCTACCAGTGCAACGACAGCTAGGCCCAGAA
GATCCAACGCTGCTACTATGTGCACGCCCGCAAGGCTAGACCCGAAAGAC
GACGCCTCCTCCCACCCGTCATCCGTCAGCTCCGTTCTC
FMO12965.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:35:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32537-RB | 1817 | CG32537-RB | 338..1163 | 9..837 | 3710 | 97.1 | Plus |
| CG32537-RA | 2442 | CG32537-RA | 963..1788 | 9..837 | 3710 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:35:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19274003..19274828 | 837..9 | 3505 | 96.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:35:56 has no hits.
FMO12965.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:37 Download gff for
FMO12965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 961..1790 | 5..839 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:38 Download gff for
FMO12965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 961..1790 | 5..839 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:12 Download gff for
FMO12965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32537-RA | 961..1790 | 5..839 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:12 Download gff for
FMO12965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19274001..19274830 | 5..839 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:38 Download gff for
FMO12965.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19168034..19168863 | 5..839 | 96 | | Minus |
