FMO12967.5prime Sequence
872 bp (872 high quality bases) assembled on 2013-01-29
> FMO12967.5prime
CAGTCGACATGTCTTCTTCGATTGCAGTGGTGCTGGTGGTGGTGCTGATT
GGGATTTCTGAGTCCATTAAGACTGATTCTCTGATGATGACCTCTTCTTT
AACTCCAGAGATTTCGAAGTCTGATAAATTAAAACTAATCGTGTCGCAAA
ATGCGGAAAGTTCAAAGGATACAGATGCCATCGAAACTGACATCTCAAAC
GAACATGATCCACGTGATGCCTTAAAGGATTCTAGTTCGCCGGATGCGGA
TGTTTTAAGGAATAAGACAACTGAAGGCTTAATTTCTTTGAATAATAAAG
CCGAGAACACAATGACAGGATTGGATGATTCTGAAAGTCTTAAGTTGGCA
CGGCCAGCGAGTTCATATCAGGAAGCGCTGCTCAATCGCCTACAGGATCA
GTTGAATCAGTTCGTTGTTGGCTTGCCCCTGGACTTGGGCTTCTCCACCT
TGAACTATATATGCAGCACCATTGTGGACCTCGGAGTGGTGAGGTCCAAG
CTAATACCGGATATGTCGCGTATGAGTTTTCTGCTTCGATCGAGTGATGA
TTGTCAGAATACCAGTATTCCACTGACGCAGGCGGAGCAGTTATGGAACA
CTACCGGATTTTATCAGGATCGACCCACTGTCTTGTTCATCACCGGCTGG
ACAACGAGCATTAACAATTCCAATAGTGGTCCCGTGGCAAAAGCTTATCT
TTGTCGCAATGATACCAATGTTTTGATTCTAGATGCTGCGAACTTCATAG
ACACCCTGTATACATGGTCTGCCCTGAACACAGAGGTTATTGGAGATTAT
CTGGCCAAGGCGCTCCTCCGGCTGAATACGAGCTATGTGACCAAACAGTT
CCATTTGGGTGAGTCACAGCTT
FMO12967.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18258-RA | 1497 | CG18258-RA | 21..884 | 8..872 | 4285 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17212327..17213044 | 8..725 | 3590 | 100 | Plus |
| X | 23542271 | X | 17213214..17213364 | 721..872 | 680 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:36:10 has no hits.
FMO12967.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:38 Download gff for
FMO12967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18258-RA | 1..863 | 9..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:47 Download gff for
FMO12967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18258-RA | 21..884 | 8..872 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:22 Download gff for
FMO12967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18258-RA | 21..884 | 8..872 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:22 Download gff for
FMO12967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17212327..17213044 | 8..725 | 100 | -> | Plus |
| X | 17213219..17213364 | 726..872 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:47 Download gff for
FMO12967.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17106360..17107077 | 8..725 | 100 | -> | Plus |
| arm_X | 17107252..17107397 | 726..872 | 98 | | Plus |
