FMO12978.5prime Sequence
990 bp (907 high quality bases) assembled on 2013-01-29
> FMO12978.5prime
CAGTCGACATGTCCGAGAAAAACCTGAAAGTGGGCGCCCGGGTCGAGCTG
ACCGGCAAGGATCTGCTTGGCACGGTTGCCTACGTGGGGATGACCAGCTT
CGCCGTCGGCAAGTGGGTGGGCGTCGTGCTGGACGAGCCGAAGGGCAAAA
ACAGCGGCTCCATCAAGGGCCAGCAGTACTTCCAGTGCGATGAGAACTGT
GGCATGTTTGTGCGACCCACGCAGCTGCGTCTGCTGGAGGCTGCTCCTGG
CAGCAGGCGCAGCATCGAGGATGTCAGCGGGGCTACGCCCACGGCTGCCC
AACCCACAAAGGCGCGGCTGAGCAGCTCTCGCACCTCGCTCTCCTCCAGT
CGCCAATCGCTGCTGGGTTCCCGCACCCAGTTGACCACTTCTCTGAGTGA
ACGCACTGCCTCCAGCAGCAGTATTGGCCCGAGGAAATCTTTGGCTCCGC
AAAACAGCAAGGATAAGGAGTCCCCCAGCACTTCATTGGCAGAAGGAGCC
CCAGCAGCAAGCGGTGGCAACGGTGCCGCTTCGCATGCCTCCTCCAAACG
GGCTTCCTTCGTGGAGACGGGCTTCCTTGAAATTCTTAAGCCGCAGTTCA
CGCCTTCCCAGCCACTGCGATCGCCCTCTTTCACCATGCCCTCCAACTCC
GGTGCTGAAGACAAGGTCGCCCTGCTGGAGGCACAGAAAACGAGCGCCGA
GCTGCAGGCTCAGCTGGCTGATCTCACCGAGAAGCTGGAAACTTTAAAGC
AGCGCAGAACGAGGATAAAGAAAGGTTGCGGGAGTTCGACAAGATGAGAT
TCAGTTTGAGCAGCTTCAGAGTTTCGAACGAAAATCATGGGTGCTCAGCT
TTCGCTTCAGAACGAGTTACTGCGCGCCAACAGGAGCAAGGATGCAATCG
AGGCAAGAGCAGCATGCTCAGAATGCAGATCTGGCGACAATGTTGAAATG
ATCCCGCTGGACAAGGAAATGTCCGAGGAAAAGGTCGAAC
FMO12978.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gl-RA | 4550 | CG9206-RA | 286..1281 | 5..988 | 4535 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13929845..13930840 | 5..988 | 4310 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:36:52 has no hits.
FMO12978.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:43 Download gff for
FMO12978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gl-RA | 281..1280 | 1..990 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:15 Download gff for
FMO12978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gl-RA | 283..1282 | 1..990 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:47 Download gff for
FMO12978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gl-RA | 283..1282 | 1..990 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:47 Download gff for
FMO12978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13929842..13930841 | 1..990 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:15 Download gff for
FMO12978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13922942..13923941 | 1..990 | 97 | | Plus |
