FMO12980.5prime Sequence
837 bp (837 high quality bases) assembled on 2013-01-29
> FMO12980.5prime
CAGTCGACATGAAATTCATCTGGGCCCTGATTTTGGTGCTCGGTTCCATT
GCAGCGAACGCTGAGCGTGATAATTACTGCGAAAGGAACGAGACGATACG
AGCCACAGTGCCAGTGACCAAACAGCGGATCATAGTAAAGCAGCCATCCA
AGTGGAAGATCTGGAAGAAGACTGAGAAGATCACAGAGATCTACGATTCA
GAGGAGGAACAAGTCACCCACAGGTTGGTTAGGGAGTGCTGCCCCGGCTA
CTTGCAGGTGGAGTCCGGCTTGTGTGAGCCCATCTGCAGTCGGGGCTGTC
CCGCCCACGCCAGTTGTGCCGCTCCAGATCGCTGTGAGTGCATTTCCGGC
TACGTGTCAGCCAGAAATCACCAGGATGGCAGCCACTACTGTGAACCCAT
CTGCGAGACCCCATGTCCTGCGGGTGCTCAGTGCGTAACGCCCAATACAT
GTGCCTGTCGCGACGGGTACACCCAATTGCAGCCAACTGACGATGGTGTG
AGTGGTGGATGTGCCCCAGTTTGCCGGGTGGGCGATGGCTGTGCCAATGG
CAAGTGCATCGATGTGGACCGCTGTGCCTGCAACTCCGGATATCGGTGGG
ATAAGGCCGAAGAGAGGTGTATCGAGCTCAGTGCAGAGTCAATCTCTGAG
GAACTGGAGACCACCGAGGACAATACGGATTCGCCGAGCACCAGTTCAAC
AGCAGTATTCACGGCCACCCTACTGTCCGGATGACTTTGTCCTGTTCCGC
GGCGAATGCCGCGAGAAGCAATTCGACAGCATGATGTGGGTTGCCTTAAA
TCCGGCTGTGGTCCGCATCCAACATGCCTGGACCTCG
FMO12980.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| NimC4-RA | 1282 | CG16876-RA | 50..874 | 9..833 | 4065 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14047631..14048455 | 9..833 | 4015 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:36:59 has no hits.
FMO12980.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:44 Download gff for
FMO12980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nimC4-RA | 48..874 | 9..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:19 Download gff for
FMO12980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimC4-RA | 50..876 | 9..837 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:51 Download gff for
FMO12980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NimC4-RA | 50..876 | 9..837 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:51 Download gff for
FMO12980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14047631..14048457 | 9..837 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:19 Download gff for
FMO12980.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14047631..14048457 | 9..837 | 99 | | Plus |
