FMO12982.5prime Sequence
260 bp (260 high quality bases) assembled on 2013-01-29
> FMO12982.5prime
CAGTCGACATGTTAGCTGAACAACCGTATATATATATATATAGTATATAT
ATTACATATATGTATGTATATACAGACACCCACATACGAGCGCCAATAGA
GCGAGATACACCCGTTTTTATTGTGCTGCGCATTTTCAACGTGCGGCTGA
ACTGTGAATTCGAGTATAGTACCCTAGATATAGGTAGAATCGGTACAAAC
CAGGTGGTACAGGTGGCATCGCGTGCAAAGCCGCACTTGATGGCAAGCTT
TCTAGACCAT
FMO12982.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11000-RC | 6816 | CG11000-RC | 5031..5264 | 9..242 | 1170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5811473..5811706 | 9..242 | 1170 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 18:36:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 997..1043 | 114..160 | 100 | 68.1 | Plus |
FMO12982.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:41 Download gff for
FMO12982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31555-RB | 917..1155 | 5..246 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:00 Download gff for
FMO12982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11000-RC | 5029..5267 | 5..246 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:34 Download gff for
FMO12982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11000-RC | 5029..5267 | 5..246 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:34 Download gff for
FMO12982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5811471..5811709 | 5..246 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:00 Download gff for
FMO12982.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1637193..1637431 | 5..246 | 98 | | Plus |
