FMO12984.5prime Sequence
1096 bp (1002 high quality bases) assembled on 2013-01-29
> FMO12984.5prime
CAGTCGACATGCGCTTTCTTGTTCTCTCAACACTGCTTCTGGCCTCTTTG
GCACTTGGCCAGGCTCAACAGCACGGTGGGCTGGCCGTCGAACACAGATC
GAGGTCGGCTCCGCTGGTCTTCGAGGAGCATCCTTACTACGGAGGATTGA
GGGGTCAGCTTCTCCAGCTGCGTCCGCAGCGGGACGGCAGTGTGGGCAGC
TTCATCCTGCAGCGCCAACAGCCGCAGTTGAGGGCTGTACCTAGAGACTC
CGATGACACCATCACCATTTCGGCCGCAAGCATCTCGGCGGTAGCTGATG
CTAGTGGAGCTTCTAGCTCCAGCAGCTCGATCTCAGCCAGCGCCAGTGAT
TTCAATCGGATTCAGTCGGCCGCCGCTCGGTTGGTTGCCATTCAGGAGTT
GGCCAAGCGCAAGGGTTCCTTCAGTGAGGAGGACAACAAGATCTATGCCA
GCAGCTTACTGGAACTGGGCCAGGCTGCCCAGAGTTTGGCCATGCTCCAG
CAAAGCGGACAGATTAAGGACTTTAGTGTTCTGCTGCAGCCGGACATGTT
TGGCAATCCTCAAAAGCAGCCAGCCAATTTCGGGCTAGAGGCCACCAACA
ATCCGGCGGACCAGAAGATCGACGAACAGAAACTGGACGAGGTCACTGAG
CAACAATTCTCGCCGGATGAGCAGTTCCTGCCCCCCAACAACGAGGATCC
CTATGAGGATGTTAACGATAGTGTGTCCGTAATGGCTCCTAAGAAAGATG
CCGCCGTGGCTGACGCAAAACCAGTGGGTCTTTCGATTGCCGGTGAAGGT
GGCGTGCCCTCCTCAAACCGACGCTGTGGCTCTCTCCGGCCGGATGGATT
GCCGTAGCTTCGCCCAAGCCACAGCCATTGCTGGAGTTTCTCCCGAGGAG
CAGCTGCCTTCAGCATTTCATTGCCCACTCGCATCACTGGTGATCAGAGT
CCCATTGCTTCGAGAGCTAGCGAAGACTATGACTATATGATGTACCGCTG
ACGTGCCGCTTTCTTGACCCGGAAACTCCTCAGCATGTCCGTCGCATCTC
TGGAGGGAATTCCTGTGAAAGTGGCCACGCCCATTGCTAGGATATG
FMO12984.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11905-RI | 1614 | CG11905-RI | 270..1352 | 9..1063 | 4705 | 97 | Plus |
| CG11905-RF | 1673 | CG11905-RF | 329..1411 | 9..1063 | 4705 | 97 | Plus |
| CG11905-RB | 1491 | CG11905-RB | 147..1229 | 9..1063 | 4705 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16929020..16929707 | 779..92 | 3425 | 99.9 | Minus |
| 3L | 28110227 | 3L | 16928795..16928957 | 933..777 | 505 | 94.5 | Minus |
| 3L | 28110227 | 3L | 16933293..16933360 | 91..24 | 325 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:36:42 has no hits.
FMO12984.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:42 Download gff for
FMO12984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11905-RB | 136..1241 | 1..1075 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:07 Download gff for
FMO12984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11905-RB | 140..1245 | 1..1075 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:42 Download gff for
FMO12984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11905-RB | 140..1245 | 1..1075 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:42 Download gff for
FMO12984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16929022..16929707 | 92..777 | 99 | <- | Minus |
| 3L | 16933293..16933360 | 24..91 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:07 Download gff for
FMO12984.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16922122..16922807 | 92..777 | 99 | <- | Minus |
| arm_3L | 16926393..16926460 | 24..91 | 98 | <- | Minus |
