FMO12985.5prime Sequence
1125 bp (999 high quality bases) assembled on 2013-01-29
> FMO12985.5prime
CAGTCGACATGGACAAGCGATCGTTGTGCCTGCTGCTCATCTGCATCAAT
CTGTGCCTGGTCATCTGGCTGGTCAGTGTGCAGCAGTTGCCGATGCTGGA
AGCGGAAATCATCGCCGATTTTAGCGGAAGTGGCGGCATTAGCAGCAGCA
GCACCGCACAGCCGCCAACGAGTGCCAAAAGTGGATTGCGGAGGAGCAGG
AGCCAACCAAACCAAATACACCAGCCTAGTCGCACACCTAGTAATAGTAA
TGATAGTAGCCTAGTTAGCAACACATTCGATAACCACCCCATGGGCACGC
CCCCCACTTTGGCGTCACAAACGCCCACGCCGCCACAGAGCAGCATGCAC
CTCATGGATCTGCCCAATTTCGTCTATCTAATAGACCAGCCCGCCTGTGA
TAAGGATGTCCGGGCACTGATATTGGTCCATTCGGCAGTGCGCAATATCG
AAAAGCGCCGGATAATCCGAGAAACGTGGGCGAATCGGAGCTATATAGAC
CAGACGCCGCTGAAGGTTTACTTCCTGGTGGGCGGGGTGAGCGCTAAGAG
CGAGAAGTGGCAGCAGTTCCTGGGACGCGAGAACCACCTGCACGGCGATC
TCATCCAGGGTAACTTCAAAGACGCCTATCGCAACATGACCTACAAGCAT
GTCATGGCTCTCAAGTGGTTCAACGAGAAGTGTGCGCATGCCCAGCTGCT
GGTGAAGGTGGACGACGATGTGTTTATGAACACACCGCAGCTGGTCAAGT
ACTTGGCGACACCCTCTCTGCCAGAGTACTCCATGCTCCGGGATCCCAAT
CTGATGCTCTGTCGATCCGTCCATCATTCGAGGGTCAAGCGTTCATATCG
TTCCAAATGGCCGGGTGACCTACAAGGAGTACCCGAATCGTTTCTATCCG
GATACTGTCCCGGATGGCCATTGTCTACGCACCGGAAGTGGTGCGTCGCC
TGTACGAGCTGACCATATGTCCAAATACTTCTGGGTAGACGATGTACTCA
TCCTGTGATCCTGGCCGAAGAAAACTGGTCGTATATCACCGGTCTTCATC
ATACCTCTGAGTCAAAAGCACGTTCGCATGCTGGATCGGCTGGGTAAGAC
TGATCTGAGATCCCCAGGTTCCTCT
FMO12985.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11357-RD | 2611 | CG11357-RD | 416..1532 | 9..1125 | 4910 | 96.7 | Plus |
CG11357-RC | 3080 | CG11357-RC | 885..2001 | 9..1125 | 4910 | 96.7 | Plus |
CG11357-RB | 2326 | CG11357-RB | 131..1247 | 9..1125 | 4910 | 96.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4551098..4551940 | 9..851 | 4215 | 100 | Plus |
3L | 28110227 | 3L | 4552114..4552279 | 862..1023 | 525 | 93.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:37:19 has no hits.
FMO12985.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:46 Download gff for
FMO12985.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11357-RB | 131..1157 | 9..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:32 Download gff for
FMO12985.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11357-RB | 131..1157 | 9..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:01 Download gff for
FMO12985.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11357-RB | 131..1157 | 9..1033 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:01 Download gff for
FMO12985.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4551098..4551940 | 9..851 | 100 | -> | Plus |
3L | 4552105..4552266 | 852..1010 | 93 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:32 Download gff for
FMO12985.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4551098..4551940 | 9..851 | 100 | -> | Plus |
arm_3L | 4552105..4552266 | 852..1010 | 93 | <- | Plus |