Clone FMO12986 Report

Search the DGRC for FMO12986

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:129
Well:86
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14482-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12986.5prime Sequence

197 bp (197 high quality bases) assembled on 2013-01-29

> FMO12986.5prime
CAGTCGACATGGCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATA
GCGAGTTCCTTCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCT
GGCCGTGCTTTACTACACCGACTGGAAGCTGGTCCTACAGTACGTGCCCA
TCTACGGATCCAAGTTCGAAAAAAGCGAGGCAAGCTTTCTAGACCAT

FMO12986.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14482-RB 561 CG14482-RB 81..251 9..179 855 100 Plus
CG14482-RA 324 CG14482-RA 81..251 9..179 855 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17572406..17572523 179..62 590 100 Minus
2R 25286936 2R 17572652..17572704 61..9 265 100 Minus
Blast to na_te.dros performed on 2014-11-28 18:37:25 has no hits.

FMO12986.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:47 Download gff for FMO12986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14482-RA 51..228 9..187 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:35 Download gff for FMO12986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14482-RA 81..258 9..187 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:04 Download gff for FMO12986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14482-RA 81..258 9..187 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:04 Download gff for FMO12986.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17572399..17572523 62..187 97 <- Minus
2R 17572652..17572704 9..61 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:35 Download gff for FMO12986.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13459904..13460028 62..187 97 <- Minus
arm_2R 13460157..13460209 9..61 100   Minus