FMO12990.5prime Sequence
626 bp (626 high quality bases) assembled on 2013-01-29
> FMO12990.5prime
CAGTCGACATGCATCTAAACGAGAACACCAAAATACTGGGTCACAGGGTC
ATCCTTGTGCCCTACGAAGCGCGCCACGTGCCCAAGTACCACGAGTGGAT
GAGCAACGAGACCCTGAGGGAGTTGACCGCATCCGAGGAACTGACCTTAG
AAGAGGAGCACGAGATGCAAAGGAGTTGGAGGGAGGACAGCGACAAGCTG
ACCTTCATTGTCCTGGATGCAGAGACTTATTCGCGTGATCAGGATGAGAT
TGCCGCCATGGTGGGCGACACCAATCTCTTCCTGCACCAAGATCCCGATA
GCCAGATACCAACGGCGGAGGCGGAAATCATGATTGCCGAACCTTATGCA
CGGGGCAAGGGATTCGGCAGGGAAGCCATGCTCCTCATGCTCAAGTACGC
CCAATCGCAGCCCCAGCTTAAATTGGATAAATTCGAGGTCAAGATCGACA
TGGACAACGCTGCATCGCTGCATTTGTTTAAGAGTTTTATGTTCGTGGAG
ACGCGTCGAGTGGAGATCTTCCACGAGGTCACCCTGGAGCGACCTATCAC
TCCAGATTGGATCAACTGGCTGGACCAGCAGGTGGATCTGCGTATGCAGT
GCTATCAGGCAAGCTTTCTAGACCAT
FMO12990.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11539-RB | 810 | CG11539-RB | 91..690 | 9..608 | 3000 | 100 | Plus |
CG11539-RA | 737 | CG11539-RA | 18..617 | 9..608 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31615404..31616003 | 608..9 | 3000 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:37:47 has no hits.
FMO12990.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:49 Download gff for
FMO12990.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11539-RA | 15..621 | 2..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:49 Download gff for
FMO12990.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11539-RA | 15..621 | 2..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:23:17 Download gff for
FMO12990.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11539-RA | 15..621 | 2..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:23:17 Download gff for
FMO12990.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31615399..31616006 | 2..612 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:49 Download gff for
FMO12990.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 27441121..27441728 | 2..612 | 99 | | Minus |