FMO12995.5prime Sequence
943 bp (917 high quality bases) assembled on 2013-01-29
> FMO12995.5prime
CAGTCGACATGGCGCGTGCAGCTCTGTGCATGGCCGTCGCATGCATTTTC
TTGCAATGCGTCTACTCTGCTAAGTTCGATGAGCAGAACCGTCGTCTAAT
TCTCGACATTGACGACCAAAAGACAACGAACCGTCAGTACTATTCGTCAA
ACATTGACACAAATGCCTATAGGTATGGCTACGATGTCGGCAAGACCGGC
AACTTCCATCACGAGACCCGCGGTCCCGATGGAGTTACCTACGGCTGCTA
TGGCCTGATCGATCCCTACCACCTCCTCCGGGCAACACACTACGTGGCCG
ATGCCCACGGTTACCGCACCGTGGAGCCGGAGAAGCCAGTGGAGACATTC
CCGCCCCATCTGTACAGCGAGACCAACGGTGGTCCATCCGAGCCTGGCAT
TGTGCTGCAGTGGGAGGAACTGTACTTCCCCATCGGATGTGGAAAGTTTG
CGAATGGTGCCCAGCACGGCGTCCCATTCTTCCTAGATGATTTTAAGAAC
AAAGGCGGCAGCAACGATGCGATACCATCGTTCTCAGCCAACACAATTGT
GATCAAGGGCTCCGACCAGAAGAGTCTGCCCATCCACAAGCCCACTGGTC
CACTGGTGCCGCAGGGCACGGGGATCTTTGGCACGGACAAGGGTCATTCG
GATCTCAGCCATCCCGGCGATCAGGCGCCGTCCTTCCATTCGGTGAACAC
CCTGCTACCGGGCAGCAACAATGATGGCCAGTACGTGCCGGATAGTAATC
CCTATGTCCATGTGATTGGACCCAATGGCGGAAATGGAGGCAATGGAGGC
AGCGGCTCTGGCGGCGTTTCGGTGAAACGGAGATTTGGAGCGTTGGCGTT
TCGACCCAATGCCCGGGTGCCCGAATGACCAAAGGACCCAGGGTCCTCCG
GTACCACCGGACCACTTGCCGCTGGGTCAGCCCGCGCGGAAGA
FMO12995.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:37:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10625-RH | 4234 | CG10625-RH | 353..1298 | 9..939 | 4290 | 97.9 | Plus |
| CG10625-RE | 3580 | CG10625-RE | 132..1077 | 9..939 | 4290 | 97.9 | Plus |
| CG10625-RB | 3441 | CG10625-RB | 124..1069 | 9..939 | 4290 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5543619..5543947 | 491..163 | 1645 | 100 | Minus |
| 3L | 28110227 | 3L | 5543233..5543465 | 724..492 | 1150 | 99.6 | Minus |
| 3L | 28110227 | 3L | 5544972..5545102 | 162..32 | 655 | 100 | Minus |
| 3L | 28110227 | 3L | 5543079..5543174 | 816..721 | 480 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 18:37:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Galileo | 2304 | Dbuz\Galileo GALILEO 2304bp | 635..674 | 187..148 | 110 | 75 | Minus |
FMO12995.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-29 10:42:45 Download gff for
FMO12995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10625-RB | 135..1068 | 9..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:27 Download gff for
FMO12995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10625-RB | 124..1057 | 9..928 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:22:59 Download gff for
FMO12995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10625-RB | 124..1057 | 9..928 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:22:59 Download gff for
FMO12995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5544972..5545101 | 33..162 | 100 | <- | Minus |
| 3L | 5550784..5550807 | 9..32 | 100 | | Minus |
| 3L | 5542953..5543174 | 721..928 | 92 | <- | Minus |
| 3L | 5543237..5543465 | 492..720 | 100 | <- | Minus |
| 3L | 5543619..5543947 | 163..491 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:27 Download gff for
FMO12995.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5536053..5536274 | 721..928 | 92 | <- | Minus |
| arm_3L | 5536337..5536565 | 492..720 | 100 | <- | Minus |
| arm_3L | 5536719..5537047 | 163..491 | 100 | <- | Minus |
| arm_3L | 5538072..5538201 | 33..162 | 100 | <- | Minus |
| arm_3L | 5543884..5543907 | 9..32 | 100 | | Minus |
