FMO13002.5prime Sequence
674 bp (674 high quality bases) assembled on 2013-01-30
> FMO13002.5prime
CAGTCGACATGCGCGTCTACCTGGCCCTGCCGCTCCTGCTGCTGGGCATC
GGCCTCAGTTTGGCCCAGTACCAGTATCAAGCGCCCCACCAAACCCTCGC
CCAGCAATTCGCCGACGTGGTGGATGTGGTCGATCCTGCAGAACAATCTA
TCAAAGCAGTGCGACCACCGAAGAGCCGCAATCAGTGCACCGCCAAGCAG
AACTGCTTCTGCGGCACTCCGAATGTCAACCGTATCGTGGGCGGCCAGCA
GGTGCGCTCCAACAAGTATCCTTGGACCGCCCAATTGGTAAAGGGTCGTC
ATTATCCCCGCCTCTTCTGCGGCGGTTCCCTAATCAATGATCGCTATGTG
CTGACCGCCGCCCATTGTGTGCATGGGAACAGGGATCAGATCACCATTCG
CCTGCTCCAGATCGACAGATCCTCCCGGGATCCCGGCATTGTGCGCAAGG
TCGTCCAGACCACTGTGCATCCTAACTACGATCCCAACCGGATTGTCAAC
GATGTGGCGCTGCTCAAGCTGGAGTCCCCTGTTCCACTGACTGGAAACAT
GCGTCCAGTCTGTCTGCCCGAGGCCAATCATAACTTTGATGGCAAGACCG
TGAGTACAAGTCTTGATTTATGTGCTAAACTGTATTTCCTTTTATGTAGG
CCTGAAGCAAGCTTTCTAGACCAT
FMO13002.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:33:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-RB | 1399 | CG3355-RB | 88..735 | 9..656 | 3240 | 100 | Plus |
| CG3355-RA | 1096 | CG3355-RA | 36..627 | 9..600 | 2960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:33:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4651765..4652213 | 208..656 | 2245 | 100 | Plus |
| 2L | 23513712 | 2L | 4651490..4651688 | 9..207 | 995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:33:29 has no hits.
FMO13002.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:16 Download gff for
FMO13002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RB | 80..746 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:06 Download gff for
FMO13002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RB | 80..746 | 1..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:05 Download gff for
FMO13002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RB | 80..746 | 1..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:05 Download gff for
FMO13002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4651482..4651688 | 1..207 | 98 | -> | Plus |
| 2L | 4651765..4652224 | 208..666 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:06 Download gff for
FMO13002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4651482..4651688 | 1..207 | 98 | -> | Plus |
| arm_2L | 4651765..4652224 | 208..666 | 99 | | Plus |
