FMO13023.5prime Sequence
1106 bp (1036 high quality bases) assembled on 2013-01-30
> FMO13023.5prime
CAGTCGACATGTCAAATCAAGCGCATATCGACTACGACAAACAATTCCAG
GATGACCTGGCCAAGGCGACCGCCCTGAGTCTAGAGCAGCATGCCCTCGA
TGACTACAGGCGAAACAAGAAGTACGGCTCCGGGTATCAGCAAAGCTCCA
CCGTTGCTGGCCGAGATTACCAGGCGGCGCAACGTAGTCAGAGCCTACAT
CAACCACGACGGCACTCGGAGGTGCATCAGGTGGCCATCAGTCCGGAGAA
TGCGGAACGATCGCGCACACCGCCGGCCCAGGGAACGGATAACGATCTGA
TCTGCTTCGCAAGTCCCACCAGCAAGCAGCCAGAGAGTAGCAGTCCCTTT
GGCAAACTTATAGAGGATCTGCAGCGGATGCAGCCGACCAATCCGCAGTC
GGCCCTGGTGCCAATGGGTCCAGTTGCGTCGGCTTCGATTCCTCCTCAAT
ACGGCTTTCCACCTCATCAGCAACGTCCAACGGCTGCTCAGCCCACACCG
TACGGCATGGTTGCAGGTGGAGTTGTTGGTGGACCGGCTTACGGTGACCT
GCAGTTGGTGCCTTACCAACCAGCTGCTCAGCAACAGAGGCCACTAAACA
GCGAGGAGCTGCAGCGGCTGTACAGCATGCCCGCTCAAATGGCCGTGGTT
CCAGTGCCGCAGCCAAACGCCTATATGTACTATCCCGGAGCTGTGGTTAC
TCCATACACGGCTCCCATTGTTCCCGGATCGGCTGCTTTTATGCCGCCGC
AGTATCCCGCACAGGGATATGGCTTTGGAGGTGCTTACACGCACATGGAT
TTGCGTCGACCCCAATCGCAACCAGCTCCCCAACAAACAGCACCGACAAC
AAGTCATCATCACAGCCAACCGTCCAACCATTCCACTTCCTCCCCCGCAG
AGGCAATGGAGTAGCCTTCCCAGCGCGTCGCAGTGCCTCGACTGTCGGGG
TTAGCTCTAGTAGCACCACTGGAAACAATGGTCATTCCTCGGTCCCACGC
AAGGGGCACGAATTTGATCGACCTCAACCACGAAGAACTACTCCGTTAAT
GCTGAGCATTCGATCCCTGCTAACGACATACTGGTGCGAAAAGCAGCCTT
CTGACA
FMO13023.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:34:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pi3K68D-RD | 6862 | CG11621-RD | 158..1245 | 9..1084 | 4975 | 98 | Plus |
| Pi3K68D-RA | 7211 | CG11621-RA | 507..1594 | 9..1084 | 4975 | 98 | Plus |
| Pi3K68D-RC | 6910 | CG11621-RC | 206..1293 | 9..1084 | 4975 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:34:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11787185..11788212 | 1033..9 | 4855 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:34:21 has no hits.
FMO13023.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:22 Download gff for
FMO13023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K68D-RC | 201..1288 | 9..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:01:37 Download gff for
FMO13023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K68D-RC | 206..1293 | 9..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:36 Download gff for
FMO13023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K68D-RC | 206..1293 | 9..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:36 Download gff for
FMO13023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11787179..11788212 | 9..1040 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:01:37 Download gff for
FMO13023.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11780279..11781312 | 9..1040 | 98 | | Minus |
