FMO13027.5prime Sequence
371 bp (371 high quality bases) assembled on 2013-01-30
> FMO13027.5prime
CAGTCGACATGTGTTTTAATGTACTGGGAGTGAGCAATCTGCTACCCGAT
TGCAGCATTGCAAACCGGGTCCATCTGTTCTCTTTGCTGCAGCAACTCCA
GAACCAGGAGCGTCGTCCGGAGGAAGTGAGTGACGAGTTGCGGGATCGCT
ACAACGTATTTCGCCAGGTTTTGCCCAACTACCCGCCACCGGAACAGCCA
GACGACGATATGCTAGCAAACTTTGATGAGTTATTCCAGGAGCAGCTTTC
AATATCGATCTTCACAGACACTGAATCATCCGGCGAGGAGACCTGCGAAT
CCAGTCTGGATAGTGACTCCGAGCAGATCAGCATCGGGATGGATCGTCAT
CATGCAAGCTTTCTAGACCAT
FMO13027.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:35:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15172-RD | 629 | CG15172-RD | 161..506 | 8..353 | 1730 | 100 | Plus |
CG15172-RC | 574 | CG15172-RC | 108..453 | 8..353 | 1730 | 100 | Plus |
CG15172-RB | 631 | CG15172-RB | 165..510 | 8..353 | 1730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:35:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 19023178..19023523 | 8..353 | 1730 | 100 | Plus |
2L | 23513712 | 2L | 19075260..19075375 | 185..70 | 460 | 93.1 | Minus |
2L | 23513712 | 2L | 19075157..19075250 | 311..218 | 365 | 92.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:35:54 has no hits.
FMO13027.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:33 Download gff for
FMO13027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15172-RA | 12..360 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:36 Download gff for
FMO13027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15172-RB | 162..510 | 1..353 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:36 Download gff for
FMO13027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15172-RB | 162..510 | 1..353 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:36 Download gff for
FMO13027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 19023175..19023523 | 1..353 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:36 Download gff for
FMO13027.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 19023175..19023523 | 1..353 | 98 | | Plus |