Clone FMO13029 Report

Search the DGRC for FMO13029

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:130
Well:29
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15403-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13029.5prime Sequence

626 bp (626 high quality bases) assembled on 2013-01-30

> FMO13029.5prime
CAGTCGACATGTTCCCAAAGTCGGGGAAGACATGTGCGCTTCTTGCAGCC
CGTTTGCCTTATGGGTTTGCGTTTAATCAACTCAAGACGATGTCACCTGT
TCATCTCTTTCACTCGACTGCCTTAATGCAAAACTACATAAGTGGAACAA
GAAAACCAATTTCAATCAGAGAAAAACGGGAATACAAATATTCATCTCAA
GACATGAACTGGACGAAACATGGAGGATGCTTTAAGCAAAACTACAGTAC
CGAATCCGCCTCCACGGGGACCGCAACGACCTTAAAGATAACTAAAAGGG
AACAACTGAAGCGGGCATTCAAGGAGTATGGAGCAACCATTGTTGTCTTT
CATGTGGTCATTTCCGTCATTTCTCTTGGAGGCTTTTATGCACTTGTTTC
CAGTGGAATAAACCTGGTGCCCGTACTGGAATACTTTGGAATGGGTTCAT
CGGCGGTTGCGGAGAAAGTTGCCGCAGGAAGCACCTTTGTTGTGGCCTTT
GCCGTTCATAAAATCTTTGCGCCAGCCAGAATCAGCATCACATTGGGCAC
CACACCGTTTATCGTGAGGTATTTGCGATCCAAGGGACTTCTGAAGCCAA
AAAGCACAGCAAGCTTTCTAGACCAT

FMO13029.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG15403-RA 855 CG15403-RA 131..730 9..608 3000 100 Plus
CG17508-RA 1228 CG17508-RA 719..971 289..541 320 75.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:06
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3128765..3129364 9..608 3000 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:36:06 has no hits.

FMO13029.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:35 Download gff for FMO13029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15403-RA 46..645 9..608 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:43 Download gff for FMO13029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15403-RA 131..730 9..608 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:43 Download gff for FMO13029.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15403-RA 131..730 9..608 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:43 Download gff for FMO13029.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 3128765..3129364 9..608 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:43 Download gff for FMO13029.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3128765..3129364 9..608 100   Plus