FMO13030.5prime Sequence
386 bp (386 high quality bases) assembled on 2013-01-30
> FMO13030.5prime
CAGTCGACATGCGCGTACCCGGAGCCCTGTTTGCCGCGCGCGGCCGAGCG
CCTCAAAGCGAGAAGGACGTGCCCTTCCAGGAGATTCTGCCTCTGCGGCT
GAAGAACACCGTGAGCGGGAAGGCGGACTCCGGATCCGATGTGGCCTGTC
TCCAGGAGATGGGCGTGCTGTTCGCCTGCTTGAAAGACAACGAATTCGTG
GAGAAGTACTGCCACAAGGAGATCAGCCAGTTCCAGAACTGCTACAAGTG
CTACATGGACCGTAAGTTTGAGGCGAAGAAGACCGTGAACCAGGGAATCG
TCCAACCGGGCAGCAACCTGAACTACAAGCAACTTAACAAGTACATGCGC
CGCTACCCCAATCCCGTAGCAAGCTTTCTAGACCAT
FMO13030.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12848-RA | 469 | CG12848-RA | 59..422 | 5..368 | 1805 | 99.7 | Plus |
| CG12848-RB | 478 | CG12848-RB | 72..431 | 9..368 | 1800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24762613..24762972 | 368..9 | 1800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:36:13 has no hits.
FMO13030.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-01-30 10:18:35 Download gff for
FMO13030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12848-RA | 42..423 | 1..381 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:47 Download gff for
FMO13030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12848-RA | 54..435 | 1..381 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:47 Download gff for
FMO13030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12848-RA | 54..435 | 1..381 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:47 Download gff for
FMO13030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24762600..24762976 | 4..381 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:47 Download gff for
FMO13030.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20650123..20650499 | 4..381 | 98 | | Minus |
